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sw_4_scaffold_1275_7

Organism: SW_4_Bacteria_49_11

near complete RP 42 / 55 MC: 2 BSCG 47 / 51 MC: 1 ASCG 7 / 38
Location: comp(5668..6036)

Top 3 Functional Annotations

Value Algorithm Source
OmpR5; response regulator id=5102537 bin=GWF1_WS6_37_7 species=WS6_GWF1_36_7 genus=WS6_GWF1_36_7 taxon_order=WS6_GWF1_36_7 taxon_class=WS6_GWF1_36_7 phylum=WS6 tax=GWF1_WS6_37_7 organism_group=WS6 (Doikabacteria) similarity UNIREF
DB: UNIREF100
  • Identity: 40.9
  • Coverage: 115.0
  • Bit_score: 107
  • Evalue 9.10e-21
rpaB; two-component response regulator Tax=RIFCSPHIGHO2_01_FULL_SM2F11_49_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 45.2
  • Coverage: 115.0
  • Bit_score: 106
  • Evalue 2.80e-20
Two component transcriptional regulator, winged helix similarity KEGG
DB: KEGG
  • Identity: 37.6
  • Coverage: 117.0
  • Bit_score: 93
  • Evalue 3.80e-17

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Taxonomy

R_SM2F11_49_9 → SM2F11 → Bacteria

Sequences

DNA sequence
Length: 369
ATGGCCCAAACACCCAACCATCTACTCGTAGTGGAAGACGAAAAACCTATTTCGCGAGTCCTCAATATAAAATTGGAACAAAAAGGCTATAACGTAACGGTCGTGCGCAACGGCAAAGATGCGCTTCGTACGTTTGAAGAAGAACAAGTAGACGGTATTCTTCTCGATCTGATTTTGCCTGAGCAAGATGGATTTGAAACATTAAGACAAATTCGAGAACAGGACCAAAACGTACCGATCGTGATACTCAGTAACCTCGGACAACCGGAAGATCGCGAACGAGTCGAAAAGTATGGCATTGAGAAATATTACGTCAAAGCCGATATTTCGCTTCATACATTGGTGGAAGAGATCAGTCAAATGATTTAG
PROTEIN sequence
Length: 123
MAQTPNHLLVVEDEKPISRVLNIKLEQKGYNVTVVRNGKDALRTFEEEQVDGILLDLILPEQDGFETLRQIREQDQNVPIVILSNLGQPEDRERVEKYGIEKYYVKADISLHTLVEEISQMI*