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sw_4_scaffold_402_7

Organism: SW_4_Bacteria_49_11

near complete RP 42 / 55 MC: 2 BSCG 47 / 51 MC: 1 ASCG 7 / 38
Location: 6845..7210

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S13; K02952 small subunit ribosomal protein S13 Tax=RIFOXYB1_FULL_RIF_OD1_06_38_37_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 58.2
  • Coverage: 122.0
  • Bit_score: 141
  • Evalue 1.00e-30
30S ribosomal protein S13 id=3013113 bin=GWC1_OD1_38_17 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation similarity UNIREF
DB: UNIREF100
  • Identity: 59.8
  • Coverage: 127.0
  • Bit_score: 136
  • Evalue 1.80e-29
rpsM; 30S ribosomal protein S13 similarity KEGG
DB: KEGG
  • Identity: 51.3
  • Coverage: 117.0
  • Bit_score: 133
  • Evalue 5.60e-29

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Taxonomy

RIFOXYB1_FULL_RIF_OD1_06_38_37_curated → RIF-OD1-6 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 366
ATGATTCGTATTGCGGGTGTTAACATTCCGGAAAATAAGAACATCGATATAGCTCTAACGCATATTTATGGTATCGGCCACTCCCGAGCGCAAGAAATTTTAAATAGCGTTCAGATTGACCATAAACGCGACGCCTCCGGACTTACCAAAGAAGAGATTAACACGCTTAAGGAATATATCGATAAAAATTATCAGATAGAAGGAGATTTGCGCCGAGAAATCTCCTACAACATCCAACGACTCAAAGAAATCGGTTCATATCGGGGGACCCGACACAGCAAAGGGTTGCCAATGACAGGGCGCACAAAGTCGAACAGCCAAACGCGACGGAGAAAGAAAGGCTCGGCACGTGTAGCTGAGAAGTAA
PROTEIN sequence
Length: 122
MIRIAGVNIPENKNIDIALTHIYGIGHSRAQEILNSVQIDHKRDASGLTKEEINTLKEYIDKNYQIEGDLRREISYNIQRLKEIGSYRGTRHSKGLPMTGRTKSNSQTRRRKKGSARVAEK*