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sw_4_scaffold_402

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_4_scaffold_402_1
Isoptericola variabilis, Isoptericola, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(323..970)
DNA (648bp) protein (216aa)
hypothetical protein n=1 Tax=Promicromonospora sukumoe RepID=UPI00036DB776
G5 domain-containing protein
G5 domain protein {ECO:0000313|EMBL:AEG45225.1}; TaxID=743718 species="Bacteria; Actinobacteria; Micrococcales; Promicromonosporaceae; Isoptericola.;" source="Isoptericola variabilis (strain 225).;"
sw_4_scaffold_402_trna_1
unknown

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1114..1197
DNA (84bp)
transferRNA
sw_4_scaffold_402_2
unknown

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1223..1852
DNA (630bp) protein (210aa)

This feature has no annotations

sw_4_scaffold_402_3
Persephonella marina, Persephonella, Aquificales, Aquificae, Aquificae, Bacteria

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1978..2244
DNA (267bp) protein (89aa)
30S ribosomal protein S15 n=1 Tax=Persephonella marina (strain DSM 14350 / EX-H1) RepID=RS15_PERMH
rpsO; 30S ribosomal protein S15
30S ribosomal protein S15 {ECO:0000255|HAMAP-Rule:MF_01343}; TaxID=123214 species="Bacteria; Aquificae; Aquificales; Hydrogenothermaceae; Persephonella.;" source="Persephonella marina (strain DSM 1435
sw_4_scaffold_402_4
Parcubacteria bacterium GW2011_GWB1_52_7, Parcubacteria, Bacteria

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2293..4353
DNA (2061bp) protein (687aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI000368D27B
Polyribonucleotide nucleotidyltransferase {ECO:0000313|EMBL:KKW28712.1}; TaxID=1618885 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_52_7.;"
polyribonucleotide nucleotidyltransferase
sw_4_scaffold_402_5
Entamoeba histolytica, Entamoeba, Eukaryota

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4366..5667
DNA (1302bp) protein (434aa)
Putative uncharacterized protein n=1 Tax=Entamoeba histolytica RepID=C4M402_ENTHI
476.t00003; hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EAL42949.1}; TaxID=5759 species="Eukaryota; Amoebozoa; Archamoebae; Entamoebidae; Entamoeba.;" source="Entamoeba histolytica.;"
sw_4_scaffold_402_6
CG_CPR16-01, CG_CPR16, Bacteria

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6493..6717
DNA (225bp) protein (75aa)
translation initiation factor IF-1 n=1 Tax=Lachnospiraceae bacterium NK4A136 RepID=UPI0003B6094A
translation initiation factor 1; K02518 translation initiation factor IF-1 Tax=CG_CPR16-01
protein translation initiation factor 1
sw_4_scaffold_402_7
RIFOXYB1_FULL_RIF_OD1_06_38_37_curated, RIF-OD1-6, Parcubacteria, Bacteria

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6845..7210
DNA (366bp) protein (122aa)
30S ribosomal protein S13; K02952 small subunit ribosomal protein S13 Tax=RIFOXYB1_FULL_RIF_OD1_06_38_37_curated
30S ribosomal protein S13 id=3013113 bin=GWC1_OD1_38_17 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
rpsM; 30S ribosomal protein S13
sw_4_scaffold_402_8
GWC1_OD1-like_46_13, Azambacteria, Parcubacteria, Bacteria

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7225..7656
DNA (432bp) protein (144aa)
30S ribosomal protein S11, small subunit ribosomal protein S11 {ECO:0000313|EMBL:KKU22989.1}; TaxID=1618619 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Azambacteria) bacterium GW2011_GW
Ribosomal protein S11 id=2193077 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
30S ribosomal protein S11
sw_4_scaffold_402_9
Capnocytophaga canimorsus, Capnocytophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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7672..8280
DNA (609bp) protein (203aa)
30S ribosomal protein S4 n=1 Tax=Capnocytophaga sp. oral taxon 332 str. F0381 RepID=L1P7C8_9FLAO
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=28188 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Capnocytophaga.;" source="Capnocytophaga
30S ribosomal protein S4
sw_4_scaffold_402_10

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8298..9251
DNA (954bp) protein (318aa)
DNA-directed RNA polymerase, alpha subunit (EC:2.7.7.6)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI00035FE435
DNA-directed RNA polymerase subunit alpha {ECO:0000313|EMBL:KKT27222.1}; TaxID=1618828 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_43_9b.;"
sw_4_scaffold_402_11
CG_CPR05_02, CG_CPR05, Bacteria

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9310..9657
DNA (348bp) protein (116aa)
50S ribosomal protein L17 n=1 Tax=Streptomyces sp. MspMP-M5 RepID=UPI00037C2B07
rplQ; 50S ribosomal protein L17 Tax=CG_CPR05_02
50S ribosomal protein L17
sw_4_scaffold_402_12
RIFOXYB1_FULL_RIF_OD1_07_40_15_curated, RIF-OD1-7, Parcubacteria, Bacteria

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9663..10037
DNA (375bp) protein (125aa)
50S ribosomal protein L13 n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI000373B2EB
rplM; 50S ribosomal protein L13; K02871 large subunit ribosomal protein L13 Tax=RIFOXYB1_FULL_RIF_OD1_07_40_15_curated
rplM; 50S ribosomal protein L13
sw_4_scaffold_402_13
GWC2_OD1-i_45_10, Moranbacteria, Parcubacteria, Bacteria

Not on your lists


10049..10471
DNA (423bp) protein (141aa)
30S ribosomal protein S9 n=1 Tax=uncultured bacterium RepID=K2EZJ4_9BACT
30S ribosomal protein S9 {ECO:0000313|EMBL:KKT89331.1}; TaxID=1618700 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Moranbacteria) bacterium GW2011_GWC2_45_10.;"
rpsI; 30S ribosomal protein S9
sw_4_scaffold_402_14
Psychroflexus gondwanensis, Psychroflexus, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

10587..10973
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Psychroflexus gondwanensis ACAM 44 RepID=N1WYZ0_9FLAO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EMY81088.1}; TaxID=1189619 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Psychroflexus.;" source="Psychroflexus gondw
sw_4_scaffold_402_15
R_RIF_OD1_07_47_12, RIF-OD1-7, Parcubacteria, Bacteria

Not on your lists

11405..11530
DNA (126bp) protein (42aa)
id=2733824 Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_07_47_12_curated
Displaying 16 items

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