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sw_4_scaffold_1026

Search features with annotation key words

Displaying 17 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_4_scaffold_1026_1
Candidatus Nanosalina sp. J07AB43, Candidatus Nanosalina, Nanohaloarchaea, Nanohaloarchaeota, Archaea

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comp(3..1271)
DNA (1269bp) protein (423aa)
Lysyl-tRNA synthetase (class I); K04566 lysyl-tRNA synthetase, class I [EC:6.1.1.6] id=18314890 bin=Nanosalina tax=Nanosalina
Lysyl-tRNA synthetase {ECO:0000313|EMBL:EGQ43078.1}; TaxID=889948 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Nanosalina.;" source="Nanosalina sp. (strain J07AB43).;"
lysyl-tRNA synthetase
sw_4_scaffold_1026_2
Candidatus Nanosalina sp. J07AB43, Candidatus Nanosalina, Nanohaloarchaea, Nanohaloarchaeota, Archaea

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1357..2541
DNA (1185bp) protein (395aa)
Peptidase family M50 n=1 Tax=Candidatus Nanosalina sp. J07AB43 RepID=G0QIJ7_9EURY
Peptidase family M50 {ECO:0000313|EMBL:EGQ43077.1}; TaxID=889948 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Nanosalina.;" source="Nanosalina sp. (strain J07AB43).;"
peptidase m50
sw_4_scaffold_1026_3
Candidatus Nanosalina sp. J07AB43, Candidatus Nanosalina, Nanohaloarchaea, Nanohaloarchaeota, Archaea

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2584..2889
DNA (306bp) protein (102aa)
ferredoxin, 2Fe-2S type, ISC system id=18314887 bin=Nanosalina tax=Nanosalina
Ferredoxin {ECO:0000313|EMBL:EGQ43075.1}; TaxID=889948 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Nanosalina.;" source="Nanosalina sp. (strain J07AB43).;"
ferredoxin, 2Fe-2S type, ISC system
sw_4_scaffold_1026_4
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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2933..4063
DNA (1131bp) protein (377aa)
Water Stress and Hypersensitive response domain-containing protein n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8D2V8_HALXS
Water Stress and Hypersensitive response domain-containing protein
Water Stress and Hypersensitive response domain-containing protein {ECO:0000313|EMBL:AEH36101.1}; Flags: Precursor;; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialba
sw_4_scaffold_1026_5
Candidatus Nanosalina sp. J07AB43, Candidatus Nanosalina, Nanohaloarchaea, Nanohaloarchaeota, Archaea

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comp(4336..4713)
DNA (378bp) protein (126aa)
hypothetical protein; K07732 riboflavin kinase, archaea type [EC:2.7.1.161] id=18314487 bin=Nanosalina tax=Nanosalina
Transcriptional regulator of a riboflavin/FAD biosynthetic operon {ECO:0000313|EMBL:EGQ43750.1}; TaxID=889948 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Nanosalina.;" source="Nan
winged helix-turn-helix domain-containing protein/riboflavin kinase
sw_4_scaffold_1026_6
unknown

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4811..5008
DNA (198bp) protein (66aa)

This feature has no annotations

sw_4_scaffold_1026_7
Candidatus Haloredivivus sp. G17, Nanohaloarchaea, Nanohaloarchaeota, Archaea

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5128..5730
DNA (603bp) protein (201aa)
Putative uncharacterized protein n=1 Tax=Candidatus Haloredivivus sp. G17 RepID=H0AB82_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EHK01948.1}; TaxID=1072681 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Haloredivivus.;" source="Haloredivivus sp. (strain G17).;"
sw_4_scaffold_1026_8
Candidatus Nanosalina sp. J07AB43, Candidatus Nanosalina, Nanohaloarchaea, Nanohaloarchaeota, Archaea

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5816..6397
DNA (582bp) protein (194aa)
superoxide dismutase (EC:1.15.1.1); K04564 superoxide dismutase, Fe-Mn family [EC:1.15.1.1] id=18313874 bin=Nanosalina tax=Nanosalina
Superoxide dismutase {ECO:0000256|RuleBase:RU000414}; EC=1.15.1.1 {ECO:0000256|RuleBase:RU000414};; TaxID=889948 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Nanosalina.;" source="
manganese and iron superoxide dismutase (EC:1.15.1.1)
sw_4_scaffold_1026_9
unknown

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6511..6603
DNA (93bp) protein (31aa)

This feature has no annotations

sw_4_scaffold_1026_10
Haloferax elongans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(6644..7390)
DNA (747bp) protein (249aa)
Uncharacterized protein n=1 Tax=Haloferax elongans ATCC BAA-1513 RepID=M0HFN8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ82532.1}; TaxID=1230453 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax elongans ATCC BAA-1513
hypothetical protein
sw_4_scaffold_1026_trna_1
unknown

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comp(7450..7524)
DNA (75bp)
transferRNA
sw_4_scaffold_1026_11

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7618..7857
DNA (240bp) protein (80aa)
Putative sugar transferase {ECO:0000313|EMBL:CEG12397.1}; TaxID=717931 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="groundwater metagenome.;"
sw_4_scaffold_1026_12
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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7883..8563
DNA (681bp) protein (227aa)
Glycosyltransferase n=2 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NU01_HALBP
glycosyltransferase
Glycosyltransferase {ECO:0000313|EMBL:ELY25608.1}; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum borinquense (st
sw_4_scaffold_1026_13
Natrinema altunense, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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8560..9609
DNA (1050bp) protein (350aa)
Glycosyl transferase group 1 n=1 Tax=Natrinema altunense JCM 12890 RepID=L9ZK61_9EURY
Glycosyl transferase group 1 {ECO:0000313|EMBL:ELY85947.1}; TaxID=1227494 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema altunense JCM 12890
group 1 glycosyl transferase
sw_4_scaffold_1026_14
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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9606..9746
DNA (141bp) protein (47aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:ELZ23544.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;"
sw_4_scaffold_1026_15
Candidatus Haloredivivus sp. G17, Nanohaloarchaea, Nanohaloarchaeota, Archaea

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9769..11034
DNA (1266bp) protein (422aa)
Family 2 glycosyl transferase n=2 Tax=Candidatus Haloredivivus sp. G17 RepID=H0ACH7_9EURY
Family 2 glycosyl transferase {ECO:0000313|EMBL:EHK01479.1}; TaxID=1072681 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Haloredivivus.;" source="Haloredivivus sp. (strain G17).;"
family 2 glycosyl transferase
sw_4_scaffold_1026_16
Candidatus Nanosalina sp. J07AB43, Candidatus Nanosalina, Nanohaloarchaea, Nanohaloarchaeota, Archaea

Not on your lists

11404..11811
DNA (408bp) protein (136aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase id=18314245 bin=Nanosalina tax=Nanosalina
NAD(P)H-nitrite reductase {ECO:0000313|EMBL:EGQ44023.1}; TaxID=889948 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Nanosalina.;" source="Nanosalina sp. (strain J07AB43).;"
NAD(P)H-nitrite reductase
Displaying 17 items

View Taxonomy
NameRatio
Archaea
76.47%
unknown
23.53%
Archaea: 0.7647058823529411unknown: 0.23529411764705882Archaeaunknown