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sw_4_scaffold_322

Search features with annotation key words

Displaying items 1-30 of 42 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_4_scaffold_322_1
Candidatus Nanosalina sp. J07AB43, Candidatus Nanosalina, Nanohaloarchaea, Nanohaloarchaeota, Archaea

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comp(1..144)
DNA (144bp) protein (48aa)
SSU ribosomal protein S28E n=1 Tax=Candidatus Nanosalina sp. J07AB43 RepID=G0QGS0_9EURY
SSU ribosomal protein S28E {ECO:0000313|EMBL:EGQ43491.1}; TaxID=889948 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Nanosalina.;" source="Nanosalina sp. (strain J07AB43).;"
sw_4_scaffold_322_2
Candidatus Haloredivivus sp. G17, Nanohaloarchaea, Nanohaloarchaeota, Archaea

Not on your lists


comp(230..604)
DNA (375bp) protein (125aa)
50S ribosomal protein L7Ae n=1 Tax=Candidatus Haloredivivus sp. G17 RepID=H0AC75_9EURY
50S ribosomal protein L7Ae {ECO:0000313|EMBL:EHK01602.1}; TaxID=1072681 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Haloredivivus.;" source="Haloredivivus sp. (strain G17).;"
50S ribosomal protein L7Ae
sw_4_scaffold_322_3
unknown

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comp(720..956)
DNA (237bp) protein (79aa)

This feature has no annotations

sw_4_scaffold_322_4
Candidatus Nanosalinarum sp. J07AB56, Candidatus Nanosalinarum, Nanohaloarchaea, Nanohaloarchaeota, Archaea

Not on your lists

comp(961..1761)
DNA (801bp) protein (267aa)
Uncharacterized protein n=1 Tax=Candidatus Nanosalina sp. J07AB43 RepID=G0QGS3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EGQ39945.1}; TaxID=889962 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Nanosalinarum.;" source="Nanosalinarum sp. (strain J07AB56).;"
transporter
sw_4_scaffold_322_5
RBG_16_Micrarchaeota_49_10_curated, Micrarchaeota, Archaea

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comp(1817..2857)
DNA (1041bp) protein (347aa)
DNA-directed DNA polymerase (EC:2.7.7.7); K04479 DNA polymerase IV (archaeal DinB-like DNA polymerase) [EC:2.7.7.7] Tax=RBG_16_Micrarchaeota_49_10_curated
DNA-directed DNA polymerase (EC:2.7.7.7)
DNA polymerase IV n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XL41_METZD
sw_4_scaffold_322_6
Natrialba asiatica, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(2917..3456)
DNA (540bp) protein (180aa)
NADPH-dependent FMN reductase n=1 Tax=Natrialba asiatica (strain ATCC 700177 / DSM 12278 / JCM 9576 / FERM P-10747 / NBRC 102637 / 172P1) RepID=M0B5Z9_NATA1
NADPH-dependent FMN reductase {ECO:0000313|EMBL:ELZ05942.1}; TaxID=29540 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba asiatica (strain ATC
NADPH-dependent FMN reductase
sw_4_scaffold_322_7
Candidatus Nanosalina sp. J07AB43, Candidatus Nanosalina, Nanohaloarchaea, Nanohaloarchaeota, Archaea

Not on your lists


comp(3458..4069)
DNA (612bp) protein (204aa)
SSU ribosomal protein S2P id=18313689 bin=Nanosalina tax=Nanosalina
30S ribosomal protein S2 {ECO:0000256|SAAS:SAAS00084186}; TaxID=889948 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Nanosalina.;" source="Nanosalina sp. (strain J07AB43).;"
30S ribosomal protein S2
sw_4_scaffold_322_8
Candidatus Haloredivivus sp. G17, Nanohaloarchaea, Nanohaloarchaeota, Archaea

Not on your lists

comp(4167..4499)
DNA (333bp) protein (111aa)
Enolase {ECO:0000256|RuleBase:RU000654}; EC=4.2.1.11 {ECO:0000256|RuleBase:RU000654};; TaxID=1072681 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Haloredivivus.;" source="Halorediv
enolase (EC:4.2.1.11)
Enolase n=1 Tax=Candidatus Haloredivivus sp. G17 RepID=H0AC70_9EURY
sw_4_scaffold_322_9
Candidatus Nanosalina sp. J07AB43, Candidatus Nanosalina, Nanohaloarchaea, Nanohaloarchaeota, Archaea

Not on your lists

comp(5402..5569)
DNA (168bp) protein (56aa)
RNA polymerase Rpb6; K03055 DNA-directed RNA polymerase subunit K [EC:2.7.7.6] id=18313690 bin=Nanosalina tax=Nanosalina
DNA-directed RNA polymerase, subunit K {ECO:0000313|EMBL:EGQ43496.1}; EC=2.7.7.6 {ECO:0000313|EMBL:EGQ43496.1};; TaxID=889948 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Nanosalin
DNA-directed RNA polymerase subunit K
sw_4_scaffold_322_10
Candidatus Nanosalina sp. J07AB43, Candidatus Nanosalina, Nanohaloarchaea, Nanohaloarchaeota, Archaea

Not on your lists

comp(5591..6355)
DNA (765bp) protein (255aa)
hypothetical protein; K07159 id=18313691 bin=Nanosalina tax=Nanosalina
Uncharacterized protein {ECO:0000313|EMBL:EGQ43497.1}; TaxID=889948 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Nanosalina.;" source="Nanosalina sp. (strain J07AB43).;"
putative protein MJ1210
sw_4_scaffold_322_11
Candidatus Nanosalina sp. J07AB43, Candidatus Nanosalina, Nanohaloarchaea, Nanohaloarchaeota, Archaea

Not on your lists

comp(6531..7283)
DNA (753bp) protein (251aa)
translation initiation factor 2, alpha subunit (eIF-2alpha) id=18313692 bin=Nanosalina tax=Nanosalina
Translation initiation factor 2, alpha subunit {ECO:0000313|EMBL:EGQ43498.1}; TaxID=889948 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Nanosalina.;" source="Nanosalina sp. (strain
translation initiation factor 2, alpha subunit (eIF-2alpha)
sw_4_scaffold_322_12
Halorubrum litoreum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7451..7624)
DNA (174bp) protein (58aa)
30S ribosomal protein S27e n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QRD1_9EURY
30S ribosomal protein S27e {ECO:0000256|HAMAP-Rule:MF_00371, ECO:0000313|EMBL:EMA64072.1}; TaxID=1227483 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" sou
rps27e; 30S ribosomal protein S27
sw_4_scaffold_322_13
Candidatus Nanosalina sp. J07AB43, Candidatus Nanosalina, Nanohaloarchaea, Nanohaloarchaeota, Archaea

Not on your lists

comp(7633..7935)
DNA (303bp) protein (101aa)
# 632017 # 632319 # -1 # ;gc_cont=0.452 id=18313695 bin=Nanosalina tax=Nanosalina
50S ribosomal protein L44e {ECO:0000256|HAMAP-Rule:MF_01476}; TaxID=889948 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Nanosalina.;" source="Nanosalina sp. (strain J07AB43).;"
sw_4_scaffold_322_14
Candidatus Nanosalina sp. J07AB43, Candidatus Nanosalina, Nanohaloarchaea, Nanohaloarchaeota, Archaea

Not on your lists

comp(7973..8608)
DNA (636bp) protein (212aa)
Uridylate kinase {ECO:0000256|SAAS:SAAS00055191}; EC=2.7.4.22 {ECO:0000256|SAAS:SAAS00055199};; TaxID=889948 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Nanosalina.;" source="Nano
uridylate kinase, putative id=18313696 bin=Nanosalina tax=Nanosalina
uridylate kinase
sw_4_scaffold_322_15
Candidatus Nanosalina sp. J07AB43, Candidatus Nanosalina, Nanohaloarchaea, Nanohaloarchaeota, Archaea

Not on your lists

comp(8610..9227)
DNA (618bp) protein (206aa)
Uncharacterized protein n=1 Tax=Candidatus Nanosalina sp. J07AB43 RepID=G0QGT1_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EGQ43502.1}; TaxID=889948 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Nanosalina.;" source="Nanosalina sp. (strain J07AB43).;"
sw_4_scaffold_322_16
Candidatus Nanosalinarum sp. J07AB56, Candidatus Nanosalinarum, Nanohaloarchaea, Nanohaloarchaeota, Archaea

Not on your lists

comp(9271..10671)
DNA (1401bp) protein (467aa)
hypothetical protein; K00992 [EC:2.7.7.-] id=18316187 bin=Nanosalinarum tax=Nanosalinarum
Eukaryotic-type DNA primase, catalytic small subunit {ECO:0000313|EMBL:EGQ39955.1}; TaxID=889962 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Nanosalinarum.;" source="Nanosalinarum
hypothetical protein
sw_4_scaffold_322_17
Natrinema pellirubrum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10727..11101)
DNA (375bp) protein (125aa)
Peptide methionine sulfoxide reductase msrB n=1 Tax=Haloterrigena thermotolerans DSM 11522 RepID=M0BRP7_9EURY
methionine-R-sulfoxide reductase
Methionine-R-sulfoxide reductase {ECO:0000313|EMBL:AGB30985.1}; Peptide methionine sulfoxide reductase msrB {ECO:0000313|EMBL:ELY80632.1}; TaxID=797303 species="Archaea; Euryarchaeota; Halobacteria; N
sw_4_scaffold_322_18
unknown

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comp(11111..11464)
DNA (354bp) protein (118aa)

This feature has no annotations

sw_4_scaffold_322_19
Candidatus Nanosalina sp. J07AB43, Candidatus Nanosalina, Nanohaloarchaea, Nanohaloarchaeota, Archaea

Not on your lists

comp(11481..12233)
DNA (753bp) protein (251aa)
proliferating cell nuclear antigen PcnA; K04802 proliferating cell nuclear antigen id=18313700 bin=Nanosalina tax=Nanosalina
DNA polymerase sliding clamp {ECO:0000256|HAMAP-Rule:MF_00317, ECO:0000256|RuleBase:RU003673}; Proliferating cell nuclear antigen homolog {ECO:0000256|HAMAP-Rule:MF_00317}; TaxID=889948 species="Archa
DNA polymerase sliding clamp
sw_4_scaffold_322_20
Candidatus Nanosalinarum sp. J07AB56, Candidatus Nanosalinarum, Nanohaloarchaea, Nanohaloarchaeota, Archaea

Not on your lists

comp(12248..12580)
DNA (333bp) protein (111aa)
OB-fold nucleic acid binding domain family protein n=1 Tax=Candidatus Nanosalinarum sp. J07AB56 RepID=G0QCF9_9EURY
OB-fold nucleic acid binding domain family protein {ECO:0000313|EMBL:EGQ39957.1}; TaxID=889962 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Nanosalinarum.;" source="Nanosalinarum s
sw_4_scaffold_322_21
Candidatus Nanosalinarum sp. J07AB56, Candidatus Nanosalinarum, Nanohaloarchaea, Nanohaloarchaeota, Archaea

Not on your lists

12617..13252
DNA (636bp) protein (212aa)
# 294875 # 295054 # 1 # ;gc_cont=0.550 id=18316191 bin=Nanosalinarum tax=Nanosalinarum
Uncharacterized protein {ECO:0000313|EMBL:EGQ39959.1}; TaxID=889962 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Nanosalinarum.;" source="Nanosalinarum sp. (strain J07AB56).;"
sw_4_scaffold_322_22
Candidatus Nanosalina sp. J07AB43, Candidatus Nanosalina, Nanohaloarchaea, Nanohaloarchaeota, Archaea

Not on your lists

comp(13258..13608)
DNA (351bp) protein (117aa)
DNA-directed RNA polymerase subunit {ECO:0000256|PIRNR:PIRNR005586}; EC=2.7.7.6 {ECO:0000256|PIRNR:PIRNR005586};; TaxID=889948 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Nanosali
DNA-directed RNA polymerase subunit n=1 Tax=Candidatus Nanosalina sp. J07AB43 RepID=G0QGT9_9EURY
tfs2; transcription factor S Tfs2
sw_4_scaffold_322_23
Candidatus Nanosalinarum sp. J07AB56, Candidatus Nanosalinarum, Nanohaloarchaea, Nanohaloarchaeota, Archaea

Not on your lists

comp(13666..14130)
DNA (465bp) protein (155aa)
LepB; Type I signal peptidase; K13280 signal peptidase, endoplasmic reticulum-type [EC:3.4.-.-] id=18316257 bin=Nanosalinarum tax=Nanosalinarum
Signal peptidase I, archaeal type {ECO:0000313|EMBL:EGQ40023.1}; TaxID=889962 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Nanosalinarum.;" source="Nanosalinarum sp. (strain J07AB5
LepB; Type I signal peptidase
sw_4_scaffold_322_24
Geoglobus ahangari, Geoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

Not on your lists

comp(14167..14685)
DNA (519bp) protein (173aa)
hypothetical protein n=1 Tax=Methanothermococcus thermolithotrophicus RepID=UPI00036D2C6A
Uncharacterized protein {ECO:0000313|EMBL:AKG91763.1}; TaxID=113653 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Geoglobus.;" source="Geoglobus ahangari.;"
hypothetical protein
sw_4_scaffold_322_25
Candidatus Nanosalina sp. J07AB43, Candidatus Nanosalina, Nanohaloarchaea, Nanohaloarchaeota, Archaea

Not on your lists

comp(14710..14952)
DNA (243bp) protein (81aa)
# 638997 # 639239 # -1 # ;gc_cont=0.436 id=18313708 bin=Nanosalina tax=Nanosalina
Uncharacterized protein {ECO:0000313|EMBL:EGQ43513.1}; TaxID=889948 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Nanosalina.;" source="Nanosalina sp. (strain J07AB43).;"
sw_4_scaffold_322_26
Candidatus Nanosalina sp. J07AB43, Candidatus Nanosalina, Nanohaloarchaea, Nanohaloarchaeota, Archaea

Not on your lists

comp(14969..15571)
DNA (603bp) protein (201aa)
Putative RNA methylase n=1 Tax=Candidatus Nanosalina sp. J07AB43 RepID=G0QGU3_9EURY
Putative RNA methylase {ECO:0000313|EMBL:EGQ43514.1}; TaxID=889948 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Nanosalina.;" source="Nanosalina sp. (strain J07AB43).;"
Ribosomal protein L11 methyltransferase
sw_4_scaffold_322_27
Candidatus Nanosalina sp. J07AB43, Candidatus Nanosalina, Nanohaloarchaea, Nanohaloarchaeota, Archaea

Not on your lists

15669..17330
DNA (1662bp) protein (554aa)
DNA or RNA helicase of superfamily II n=1 Tax=Candidatus Nanosalina sp. J07AB43 RepID=G0QGU4_9EURY
DNA or RNA helicase of superfamily II {ECO:0000313|EMBL:EGQ43515.1}; TaxID=889948 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Nanosalina.;" source="Nanosalina sp. (strain J07AB43)
DNA/RNA helicase, superfamily ii
sw_4_scaffold_322_28
Candidatus Nanosalina sp. J07AB43, Candidatus Nanosalina, Nanohaloarchaea, Nanohaloarchaeota, Archaea

Not on your lists

17445..18419
DNA (975bp) protein (325aa)
ABC-type uncharacterized transport system, ATPase component id=18313712 bin=Nanosalina species=unknown genus=unknown taxon_order=unknown taxon_class=Nanohaloarchaea phylum=Euryarchaeota tax=Nanosalina
ABC-type uncharacterized transport system, ATPase component {ECO:0000313|EMBL:EGQ43517.1}; TaxID=889948 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Nanosalina.;" source="Nanosalin
ABC transporter, ATP-binding protein
sw_4_scaffold_322_29
Candidatus Haloredivivus sp. G17, Nanohaloarchaea, Nanohaloarchaeota, Archaea

Not on your lists

18424..19203
DNA (780bp) protein (260aa)
Putative uncharacterized protein n=2 Tax=Candidatus Haloredivivus sp. G17 RepID=H0AF81_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EHK00559.1}; TaxID=1072681 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Haloredivivus.;" source="Haloredivivus sp. (strain G17).;"
hypothetical protein
sw_4_scaffold_322_30
Candidatus Nanosalinarum sp. J07AB56, Candidatus Nanosalinarum, Nanohaloarchaea, Nanohaloarchaeota, Archaea

Not on your lists

19200..19991
DNA (792bp) protein (264aa)
hypothetical protein; K01992 ABC-2 type transport system permease protein id=18316268 bin=Nanosalinarum tax=Nanosalinarum
ABC-type uncharacterized transport system, permease component {ECO:0000313|EMBL:EGQ40034.1}; TaxID=889962 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Nanosalinarum.;" source="Nano
hypothetical protein
Displaying items 1-30 of 42 in total

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