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sw_4_scaffold_975

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Displaying 18 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_4_scaffold_975_1
Candidatus Nanosalina sp. J07AB43, Candidatus Nanosalina, Nanohaloarchaea, Nanohaloarchaeota, Archaea

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comp(3..395)
DNA (393bp) protein (131aa)
rps19R; 30S ribosomal protein S19e; K02966 small subunit ribosomal protein S19e id=18313604 bin=Nanosalina tax=Nanosalina
30S ribosomal protein S19e {ECO:0000256|HAMAP-Rule:MF_01474}; TaxID=889948 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Nanosalina.;" source="Nanosalina sp. (strain J07AB43).;"
30S ribosomal protein S19
sw_4_scaffold_975_2
Halorubrum saccharovorum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(448..1035)
DNA (588bp) protein (196aa)
Thymidine kinase {ECO:0000256|HAMAP-Rule:MF_00124, ECO:0000313|EMBL:KDS90860.1}; EC=2.7.1.21 {ECO:0000256|HAMAP-Rule:MF_00124};; TaxID=2248 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales
thymidine kinase (EC:2.7.1.21)
Thymidine kinase n=1 Tax=Halogranum salarium B-1 RepID=J3JF45_9EURY
sw_4_scaffold_975_3
Candidatus Haloredivivus sp. G17, Nanohaloarchaea, Nanohaloarchaeota, Archaea

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comp(1117..3042)
DNA (1926bp) protein (642aa)
thrS; threonyl-tRNA synthetase (EC:6.1.1.3); K01868 threonyl-tRNA synthetase [EC:6.1.1.3] id=18311373 bin=Haloredivivus tax=Haloredivivus
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184};; Threonyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00184}; TaxID=1072681 species="Archaea; Nan
thrS; threonyl-tRNA synthetase (EC:6.1.1.3)
sw_4_scaffold_975_4
Candidatus Nanosalina sp. J07AB43, Candidatus Nanosalina, Nanohaloarchaea, Nanohaloarchaeota, Archaea

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comp(3082..3669)
DNA (588bp) protein (196aa)
# 561309 # 561977 # -1 # ;gc_cont=0.457 id=18313608 bin=Nanosalina tax=Nanosalina
Uncharacterized Yip1 domain protein {ECO:0000313|EMBL:EGQ43406.1}; TaxID=889948 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Nanosalina.;" source="Nanosalina sp. (strain J07AB43).;
sw_4_scaffold_975_5
Candidatus Haloredivivus sp. G17, Nanohaloarchaea, Nanohaloarchaeota, Archaea

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3805..4326
DNA (522bp) protein (174aa)
tRNA (cytidine(56)-2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00077}; EC=2.1.1.206 {ECO:0000256|HAMAP-Rule:MF_00077};; tRNA ribose 2'-O-methyltransferase aTrm56 {ECO:0000256|HAMAP-Rule:MF_0007
tRNA 2'-O-methylase id=18311372 bin=Haloredivivus tax=Haloredivivus
tRNA 2'-O-methylase
sw_4_scaffold_975_6
unknown

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4461..5069
DNA (609bp) protein (203aa)

This feature has no annotations

sw_4_scaffold_975_7
Candidatus Haloredivivus sp. G17, Nanohaloarchaea, Nanohaloarchaeota, Archaea

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comp(5071..5976)
DNA (906bp) protein (302aa)
Ribonuclease Z {ECO:0000256|HAMAP-Rule:MF_01818}; Short=RNase Z {ECO:0000256|HAMAP-Rule:MF_01818};; EC=3.1.26.11 {ECO:0000256|HAMAP-Rule:MF_01818};; tRNA 3 endonuclease {ECO:0000256|HAMAP-Rule:MF_0181
ribonuclease Z (EC:3.1.26.11)
Ribonuclease Z n=1 Tax=Candidatus Haloredivivus sp. G17 RepID=H0A9Y9_9EURY
sw_4_scaffold_975_8
unknown

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6059..6490
DNA (432bp) protein (144aa)

This feature has no annotations

sw_4_scaffold_975_9
Candidatus Nanosalina sp. J07AB43, Candidatus Nanosalina, Nanohaloarchaea, Nanohaloarchaeota, Archaea

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comp(6487..7251)
DNA (765bp) protein (255aa)
Putative DNA modification methylase {ECO:0000313|EMBL:EGQ42682.1}; TaxID=889948 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Nanosalina.;" source="Nanosalina sp. (strain J07AB43).;
tRNA-(G10-N2) methyltransferase; tRNA-(G10-N2) dimethyltransferase id=18314519 bin=Nanosalina tax=Nanosalina
methyltransferase-like protein
sw_4_scaffold_975_10
Candidatus Haloredivivus sp. G17, Nanohaloarchaea, Nanohaloarchaeota, Archaea

Not on your lists

comp(7389..8384)
DNA (996bp) protein (332aa)
Putative uncharacterized protein n=1 Tax=Candidatus Haloredivivus sp. G17 RepID=H0A9Y6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EHK02384.1}; TaxID=1072681 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Haloredivivus.;" source="Haloredivivus sp. (strain G17).;"
UPF0104 family protein
sw_4_scaffold_975_11
unknown

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comp(8374..8490)
DNA (117bp) protein (39aa)

This feature has no annotations

sw_4_scaffold_975_12
Candidatus Nanosalina sp. J07AB43, Candidatus Nanosalina, Nanohaloarchaea, Nanohaloarchaeota, Archaea

Not on your lists

8574..8891
DNA (318bp) protein (106aa)
hypothetical protein id=18313656 bin=Nanosalina tax=Nanosalina
Putative metal-sulfur cluster biosynthetic enzyme {ECO:0000313|EMBL:EGQ43462.1}; TaxID=889948 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Nanosalina.;" source="Nanosalina sp. (str
hypothetical protein
sw_4_scaffold_975_13
unknown

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9164..9370
DNA (207bp) protein (69aa)

This feature has no annotations

sw_4_scaffold_975_14
Tribolium castaneum, Tribolium, Coleoptera, Neoptera, Arthropoda, Metazoa

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comp(9693..11516)
DNA (1824bp) protein (608aa)
Putative uncharacterized protein n=1 Tax=Tribolium castaneum RepID=D6WYW1_TRICA
Putative uncharacterized protein {ECO:0000313|EMBL:EFA09013.1}; TaxID=7070 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Coleoptera; Polyph
chromosome segregation protein SMC
sw_4_scaffold_975_trna_1
unknown

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comp(11611..11768)
DNA (158bp)
transferRNA
sw_4_scaffold_975_15
Candidatus Nanosalinarum sp. J07AB56, Candidatus Nanosalinarum, Nanohaloarchaea, Nanohaloarchaeota, Archaea

Not on your lists

11861..12301
DNA (441bp) protein (147aa)
# 262551 # 263036 # 1 # ;gc_cont=0.560 id=18316141 bin=Nanosalinarum tax=Nanosalinarum
Uncharacterized protein {ECO:0000313|EMBL:EGQ39912.1}; TaxID=889962 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Nanosalinarum.;" source="Nanosalinarum sp. (strain J07AB56).;"
sw_4_scaffold_975_16
Candidatus Haloredivivus sp. G17, Nanohaloarchaea, Nanohaloarchaeota, Archaea

Not on your lists


12304..13053
DNA (750bp) protein (250aa)
rRNA biogenesis protein Nop56/Nop58 n=1 Tax=Candidatus Haloredivivus sp. G17 RepID=H0AC85_9EURY
rRNA biogenesis protein Nop56/Nop58 {ECO:0000313|EMBL:EHK01612.1}; TaxID=1072681 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Haloredivivus.;" source="Haloredivivus sp. (strain G17
hypothetical protein
sw_4_scaffold_975_17
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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13103..13519
DNA (417bp) protein (139aa)
Sulfatase n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0LUD0_9EURY
Sulfatase {ECO:0000313|EMBL:EMA37036.1}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma lacisalsi AJ5.;"
arylsulfatase A family protein
Displaying 18 items

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