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sw_4_scaffold_113_7

Organism: SW_4_Nanohaloarchaea_43_9

near complete RP 37 / 55 MC: 5 BSCG 22 / 51 ASCG 36 / 38 MC: 3
Location: comp(3752..4324)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit D; K03047 DNA-directed RNA polymerase subunit D [EC:2.7.7.6] id=18314577 bin=Nanosalina species=unknown genus=unknown taxon_order=unknown taxon_class=Nanohaloarchaea phylum=Euryarchaeota tax=Nanosalina similarity UNIREF
DB: UNIREF100
  • Identity: 59.7
  • Coverage: 191.0
  • Bit_score: 242
  • Evalue 4.80e-61
rpoD; DNA-directed RNA polymerase subunit D (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 39.7
  • Coverage: 146.0
  • Bit_score: 122
  • Evalue 1.60e-25
DNA-directed RNA polymerase, alpha subunit/40 kD subunit {ECO:0000313|EMBL:EGQ42747.1}; TaxID=889948 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Nanosalina.;" source="Nanosalina s similarity UNIPROT
DB: UniProtKB
  • Identity: 59.5
  • Coverage: 190.0
  • Bit_score: 242
  • Evalue 6.70e-61

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Taxonomy

Candidatus Nanosalina sp. J07AB43 → Candidatus Nanosalina → Nanohaloarchaea → Nanohaloarchaeota → Archaea

Sequences

DNA sequence
Length: 573
ATGGAAGTTGAAACAGTAGAAGAAACAGAAGATGTTCTGAAAGTAGAAATCTCAGGTATAAACGAAGTGATAGCCAATTCGCTCAGAAGATCAATGATGATCAAAGTCCCAACACTTTCAGTCGAGGAACTAGAAATCAGAAAAAACGGTTCCGCACTTATCGACGAAATTCTAGCAAACAGGATCGGTCAAGTACCTTTCACAATCCCTGAGAACGTCGACGAGGATGATAAAGTTCACATCGCTCTGAAGCAGGAAGGACCTGGAACAGTTCTCGCAGAAGACCTTCAGGCAGACAACGATGAGGCAGAACCTGTCAATCCAGAAGCTGTAATCGTCGACCTGAAAGAAGATCAGGCAGTTGACCTAGAAGCAGAAGCAGAACTCAGGAAAGGAGAGGAACACGCCAAACATCAGGGAGGGACAATCGGTTACGAAAAGAAAAGCGACGACACATACGAGTTCAGGATCGAATCAACATCAGGATACAGCAACGAAGAACTACTACAGAGAGGAGTCGAGGAAATCAAGAACCGACTCGATGAGTTCGAAGAAGCAGTAGCCGAGATTTAG
PROTEIN sequence
Length: 191
MEVETVEETEDVLKVEISGINEVIANSLRRSMMIKVPTLSVEELEIRKNGSALIDEILANRIGQVPFTIPENVDEDDKVHIALKQEGPGTVLAEDLQADNDEAEPVNPEAVIVDLKEDQAVDLEAEAELRKGEEHAKHQGGTIGYEKKSDDTYEFRIESTSGYSNEELLQRGVEEIKNRLDEFEEAVAEI*