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sw_4_scaffold_113

Search features with annotation key words

Displaying items 1-30 of 55 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_4_scaffold_113_1
unknown

Not on your lists

comp(1..555)
DNA (555bp) protein (185aa)

This feature has no annotations

sw_4_scaffold_113_2
Clostridium tetanomorphum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(569..1081)
DNA (513bp) protein (171aa)
Cell wall-binding protein n=1 Tax=Desulfitobacterium dehalogenans (strain ATCC 51507 / DSM 9161 / JW/IU-DC1) RepID=I4A8F5_DESDJ
Surface/cell-adhesion protein/N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:KAJ50358.1}; TaxID=1230342 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" s
N-acetylmuramoyl-L-alanine amidase
sw_4_scaffold_113_3
Candidatus Nanosalina sp. J07AB43, Candidatus Nanosalina, Nanohaloarchaea, Nanohaloarchaeota, Archaea

Not on your lists

1167..1685
DNA (519bp) protein (173aa)
deoxyuridine 5'-triphosphate nucleotidohydrolase; K01520 dUTP pyrophosphatase [EC:3.6.1.23] id=18313565 bin=Nanosalina tax=Nanosalina
Deoxycytidine deaminase (dUTP diphosphatase) (EC:3.6.1.23)
Deoxycytidine deaminase {ECO:0000313|EMBL:EGQ43362.1}; TaxID=889948 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Nanosalina.;" source="Nanosalina sp. (strain J07AB43).;"
sw_4_scaffold_113_4
Candidatus Nanosalinarum sp. J07AB56, Candidatus Nanosalinarum, Nanohaloarchaea, Nanohaloarchaeota, Archaea

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1873..2226
DNA (354bp) protein (118aa)
# 715438 # 715803 # -1 # ;gc_cont=0.574 id=18315165 bin=Nanosalinarum tax=Nanosalinarum
Uncharacterized protein {ECO:0000313|EMBL:EGQ40410.1}; TaxID=889962 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Nanosalinarum.;" source="Nanosalinarum sp. (strain J07AB56).;"
sw_4_scaffold_113_5
unknown

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2223..2960
DNA (738bp) protein (246aa)

This feature has no annotations

sw_4_scaffold_113_trna_3
unknown

Not on your lists

comp(3042..3183)
DNA (142bp)
transferRNA
sw_4_scaffold_113_6
unknown

Not on your lists

comp(3224..3706)
DNA (483bp) protein (161aa)

This feature has no annotations

sw_4_scaffold_113_7
Candidatus Nanosalina sp. J07AB43, Candidatus Nanosalina, Nanohaloarchaea, Nanohaloarchaeota, Archaea

Not on your lists

comp(3752..4324)
DNA (573bp) protein (191aa)
DNA-directed RNA polymerase subunit D; K03047 DNA-directed RNA polymerase subunit D [EC:2.7.7.6] id=18314577 bin=Nanosalina species=unknown genus=unknown taxon_order=unknown taxon_class=Nanohaloarchaea phylum=Euryarchaeota tax=Nanosalina
rpoD; DNA-directed RNA polymerase subunit D (EC:2.7.7.6)
DNA-directed RNA polymerase, alpha subunit/40 kD subunit {ECO:0000313|EMBL:EGQ42747.1}; TaxID=889948 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Nanosalina.;" source="Nanosalina s
sw_4_scaffold_113_8
Candidatus Nanosalina sp. J07AB43, Candidatus Nanosalina, Nanohaloarchaea, Nanohaloarchaeota, Archaea

Not on your lists


comp(4343..4726)
DNA (384bp) protein (128aa)
30S ribosomal protein S11 n=1 Tax=Candidatus Nanosalina sp. J07AB43 RepID=G0QHL8_9EURY
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=889948 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Nanosalina.;" source="Nanosalina sp. (strain J07AB43).;"
rps11p; 30S ribosomal protein S11
sw_4_scaffold_113_9
Candidatus Haloredivivus sp. G17, Nanohaloarchaea, Nanohaloarchaeota, Archaea

Not on your lists


comp(4775..5374)
DNA (600bp) protein (200aa)
30S ribosomal protein S4P n=1 Tax=Candidatus Haloredivivus sp. G17 RepID=H0A9I5_9EURY
30S ribosomal protein S4P {ECO:0000313|EMBL:EHK02546.1}; TaxID=1072681 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Haloredivivus.;" source="Haloredivivus sp. (strain G17).;"
30S ribosomal protein S4
sw_4_scaffold_113_10
Candidatus Nanosalina sp. J07AB43, Candidatus Nanosalina, Nanohaloarchaea, Nanohaloarchaeota, Archaea

Not on your lists


comp(5374..5862)
DNA (489bp) protein (163aa)
30S ribosomal protein S13 n=1 Tax=Candidatus Nanosalina sp. J07AB43 RepID=G0QHM0_9EURY
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=889948 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Nanosalina.;" source="Nanosalina sp. (strain J07AB43).;"
rps13p; 30S ribosomal protein S13
sw_4_scaffold_113_11
Candidatus Nanosalina sp. J07AB43, Candidatus Nanosalina, Nanohaloarchaea, Nanohaloarchaeota, Archaea

Not on your lists

comp(5926..6207)
DNA (282bp) protein (94aa)
peptidylprolyl isomerase id=18314737 bin=Nanosalina tax=Nanosalina
Parvulin-like peptidyl-prolyl isomerase {ECO:0000313|EMBL:EGQ42912.1}; TaxID=889948 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Nanosalina.;" source="Nanosalina sp. (strain J07AB4
peptidylprolyl isomerase
sw_4_scaffold_113_trna_2
unknown

Not on your lists

comp(6570..6714)
DNA (145bp)
transferRNA
sw_4_scaffold_113_12
Candidatus Nanosalina sp. J07AB43, Candidatus Nanosalina, Nanohaloarchaea, Nanohaloarchaeota, Archaea

Not on your lists

comp(6773..7678)
DNA (906bp) protein (302aa)
tRNA pseudouridine synthase B; K11131 H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-] id=18314302 bin=Nanosalina tax=Nanosalina
Pseudouridine synthase {ECO:0000313|EMBL:EGQ43950.1}; TaxID=889948 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Nanosalina.;" source="Nanosalina sp. (strain J07AB43).;"
tRNA pseudouridine synthase B
sw_4_scaffold_113_13
Candidatus Nanosalinarum sp. J07AB56, Candidatus Nanosalinarum, Nanohaloarchaea, Nanohaloarchaeota, Archaea

Not on your lists

comp(7732..8469)
DNA (738bp) protein (246aa)
Putative membrane protein n=1 Tax=Candidatus Nanosalinarum sp. J07AB56 RepID=G0QBA0_9EURY
Putative membrane protein {ECO:0000313|EMBL:EGQ40660.1}; TaxID=889962 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Nanosalinarum.;" source="Nanosalinarum sp. (strain J07AB56).;"
membrane protein
sw_4_scaffold_113_14
Candidatus Haloredivivus sp. G17, Nanohaloarchaea, Nanohaloarchaeota, Archaea

Not on your lists

comp(8549..9994)
DNA (1446bp) protein (482aa)
preprotein translocase subunit SecY; K03076 preprotein translocase subunit SecY id=18312216 bin=Haloredivivus tax=Haloredivivus
Protein translocase subunit SecY {ECO:0000256|RuleBase:RU000537}; Flags: Fragment;; TaxID=1072681 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Haloredivivus.;" source="Haloredivivu
Protein translocase subunit SecY
sw_4_scaffold_113_15
Candidatus Nanosalinarum sp. J07AB56, Candidatus Nanosalinarum, Nanohaloarchaea, Nanohaloarchaeota, Archaea

Not on your lists


comp(10048..10485)
DNA (438bp) protein (146aa)
rpl15; 50S ribosomal protein L15 id=18315428 bin=Nanosalinarum tax=Nanosalinarum
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341}; TaxID=889962 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Nanosalinarum.;" source="Nanosalinarum sp. (strain J07AB56).;
rpl15; 50S ribosomal protein L15
sw_4_scaffold_113_16
Candidatus Haloredivivus sp. G17, Nanohaloarchaea, Nanohaloarchaeota, Archaea

Not on your lists

comp(10497..10844)
DNA (348bp) protein (116aa)
50S ribosomal protein L7e (L30p); K02907 large subunit ribosomal protein L30 id=18312214 bin=Haloredivivus species=unknown genus=unknown taxon_order=unknown taxon_class=Nanohaloarchaea phylum=Euryarchaeota tax=Haloredivivus
50S ribosomal protein L7e (L30p) {ECO:0000313|EMBL:EHK00537.1}; TaxID=1072681 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Haloredivivus.;" source="Haloredivivus sp. (strain G17).;
rpl30p; 50S ribosomal protein L30P
sw_4_scaffold_113_17
Candidatus Haloredivivus sp. G17, Nanohaloarchaea, Nanohaloarchaeota, Archaea

Not on your lists


comp(10850..11512)
DNA (663bp) protein (221aa)
30S ribosomal protein S5P n=3 Tax=Candidatus Haloredivivus sp. G17 RepID=H0AFA1_9EURY
30S ribosomal protein S5P {ECO:0000313|EMBL:EHK00536.1}; TaxID=1072681 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Haloredivivus.;" source="Haloredivivus sp. (strain G17).;"
rps5p; 30S ribosomal protein S5P
sw_4_scaffold_113_18
Candidatus Nanosalina sp. J07AB43, Candidatus Nanosalina, Nanohaloarchaea, Nanohaloarchaeota, Archaea

Not on your lists


comp(11512..12021)
DNA (510bp) protein (170aa)
rpl18p; 50S ribosomal protein L18P id=18314307 bin=Nanosalina tax=Nanosalina
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337, ECO:0000256|SAAS:SAAS00243986}; TaxID=889948 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Nanosalina.;" source="Nanosali
rpl18p; 50S ribosomal protein L18P
sw_4_scaffold_113_19
Candidatus Haloredivivus sp. G17, Nanohaloarchaea, Nanohaloarchaeota, Archaea

Not on your lists

comp(12028..12471)
DNA (444bp) protein (148aa)
50S ribosomal protein L19e n=3 Tax=Candidatus Haloredivivus sp. G17 RepID=H0AA73_9EURY
50S ribosomal protein L19e {ECO:0000256|HAMAP-Rule:MF_01475}; TaxID=1072681 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Haloredivivus.;" source="Haloredivivus sp. (strain G17).;"
rpl19R; 50S ribosomal protein L19
sw_4_scaffold_113_20
Candidatus Nanosalina sp. J07AB43, Candidatus Nanosalina, Nanohaloarchaea, Nanohaloarchaeota, Archaea

Not on your lists

comp(12468..12824)
DNA (357bp) protein (119aa)
Ribosomal protein L32E n=1 Tax=Candidatus Nanosalina sp. J07AB43 RepID=G0QF30_9EURY
Ribosomal protein L32E {ECO:0000313|EMBL:EGQ43959.1}; TaxID=889948 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Nanosalina.;" source="Nanosalina sp. (strain J07AB43).;"
ribosomal protein L32E
sw_4_scaffold_113_21
Candidatus Haloredivivus sp. G17, Nanohaloarchaea, Nanohaloarchaeota, Archaea

Not on your lists


comp(12825..13358)
DNA (534bp) protein (178aa)
50S ribosomal protein L6P n=2 Tax=Candidatus Haloredivivus sp. G17 RepID=H0AA71_9EURY
50S ribosomal protein L6P {ECO:0000313|EMBL:EHK02306.1}; TaxID=1072681 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Haloredivivus.;" source="Haloredivivus sp. (strain G17).;"
50S ribosomal protein L6
sw_4_scaffold_113_22
Candidatus Nanosalina sp. J07AB43, Candidatus Nanosalina, Nanohaloarchaea, Nanohaloarchaeota, Archaea

Not on your lists


comp(13359..13748)
DNA (390bp) protein (130aa)
30S ribosomal protein S8 n=1 Tax=Candidatus Nanosalina sp. J07AB43 RepID=G0QF32_9EURY
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=889948 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Nanosalina.;" source="Nanosalina sp. (strain J07AB43).;"
rps8p; 30S ribosomal protein S8
sw_4_scaffold_113_23
Candidatus Haloredivivus sp. G17, Nanohaloarchaea, Nanohaloarchaeota, Archaea

Not on your lists


comp(13812..14036)
DNA (225bp) protein (75aa)
30S ribosomal protein S14 type Z n=1 Tax=Candidatus Haloredivivus sp. G17 RepID=H0AA69_9EURY
30S ribosomal protein S14 type Z {ECO:0000256|HAMAP-Rule:MF_01364}; TaxID=1072681 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Haloredivivus.;" source="Haloredivivus sp. (strain G1
rps14P; 30S ribosomal protein S14
sw_4_scaffold_113_24
Candidatus Nanosalina sp. J07AB43, Candidatus Nanosalina, Nanohaloarchaea, Nanohaloarchaeota, Archaea

Not on your lists


comp(14036..14548)
DNA (513bp) protein (171aa)
50S ribosomal protein L5; K02931 large subunit ribosomal protein L5 id=18314313 bin=Nanosalina tax=Nanosalina
50S ribosomal protein L5 {ECO:0000256|RuleBase:RU003931}; TaxID=889948 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Nanosalina.;" source="Nanosalina sp. (strain J07AB43).;"
rpl5p; 50S ribosomal protein L5
sw_4_scaffold_113_25
Candidatus Nanosalina sp. J07AB43, Candidatus Nanosalina, Nanohaloarchaea, Nanohaloarchaeota, Archaea

Not on your lists

comp(14556..15206)
DNA (651bp) protein (217aa)
Ribosomal protein S4E n=1 Tax=Candidatus Nanosalina sp. J07AB43 RepID=G0QF35_9EURY
Ribosomal protein S4E {ECO:0000313|EMBL:EGQ43964.1}; TaxID=889948 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Nanosalina.;" source="Nanosalina sp. (strain J07AB43).;"
30S ribosomal protein S4e
sw_4_scaffold_113_26
Candidatus Haloredivivus sp. G17, Nanohaloarchaea, Nanohaloarchaeota, Archaea

Not on your lists


comp(15214..15966)
DNA (753bp) protein (251aa)
rpl24p; 50S ribosomal protein L24; K02895 large subunit ribosomal protein L24 id=18311818 bin=Haloredivivus species=unknown genus=unknown taxon_order=unknown taxon_class=Nanohaloarchaea phylum=Euryarchaeota tax=Haloredivivus
50S ribosomal protein L24P {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=1072681 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Haloredivivus.;" source="Haloredivivus sp. (strain G17).;"
50S ribosomal protein L24
sw_4_scaffold_113_27
Candidatus Haloredivivus sp. G17, Nanohaloarchaea, Nanohaloarchaeota, Archaea

Not on your lists


comp(15977..16375)
DNA (399bp) protein (133aa)
rpl14p; 50S ribosomal protein L14P; K02874 large subunit ribosomal protein L14 id=18311817 bin=Haloredivivus species=unknown genus=unknown taxon_order=unknown taxon_class=Nanohaloarchaea phylum=Euryarchaeota tax=Haloredivivus
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367}; TaxID=1072681 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Haloredivivus.;" source="Haloredivivus sp. (strain G17).;"
rpl14p; 50S ribosomal protein L14P
sw_4_scaffold_113_28
Candidatus Haloredivivus sp. G17, Nanohaloarchaea, Nanohaloarchaeota, Archaea

Not on your lists


comp(16434..16721)
DNA (288bp) protein (96aa)
30S ribosomal protein S17P n=1 Tax=Candidatus Haloredivivus sp. G17 RepID=H0AB74_9EURY
30S ribosomal protein S17P {ECO:0000256|HAMAP-Rule:MF_01345}; TaxID=1072681 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Haloredivivus.;" source="Haloredivivus sp. (strain G17).;"
30S ribosomal protein S17
Displaying items 1-30 of 55 in total

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