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sw_4_scaffold_113_12

Organism: SW_4_Nanohaloarchaea_43_9

near complete RP 37 / 55 MC: 5 BSCG 22 / 51 ASCG 36 / 38 MC: 3
Location: comp(6773..7678)

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase B; K11131 H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-] id=18314302 bin=Nanosalina tax=Nanosalina similarity UNIREF
DB: UNIREF100
  • Identity: 65.0
  • Coverage: 317.0
  • Bit_score: 425
  • Evalue 4.80e-116
Pseudouridine synthase {ECO:0000313|EMBL:EGQ43950.1}; TaxID=889948 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Nanosalina.;" source="Nanosalina sp. (strain J07AB43).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.0
  • Coverage: 317.0
  • Bit_score: 425
  • Evalue 6.80e-116
tRNA pseudouridine synthase B similarity KEGG
DB: KEGG
  • Identity: 44.9
  • Coverage: 314.0
  • Bit_score: 274
  • Evalue 3.00e-71

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Taxonomy

Candidatus Nanosalina sp. J07AB43 → Candidatus Nanosalina → Nanohaloarchaea → Nanohaloarchaeota → Archaea

Sequences

DNA sequence
Length: 906
ATGAAGTCAGCCAAATGGTACACAAAAGAAGAAGCAGAGACCGACCCAGAGTTCGGGAGTATACCTGAGGAAAGAAGCATAGAAGAACTCATGGAGAAAGGTATCATGCTCGTGGACAAACCTTTCGGCCCACAGAGCAATCAAGTCTCTACATGGATAAAGAAAGAACTTGATGTAAAGAAAACCGGTCATTTCGGCACCTTAGATCCAAATGCAACAGGGATCCTACCAGTAGGCCTCAACAAAGGAACAAGAGGCAGCAAAGCCATGAGCAAAGCCGATAAGGAGTATATCTTCGAGGCCAACCTAGGAGAAGGGAAAAAGAAGGCTGAGATAAGAGAAGTACTTAACAGTTTCAAGGGAGTCAACAAGCAGGTACCCCCTGAGAAAAGCGCAGTAAAGAGGATTTTAGGAGGAGTTAAATGTGAATCAGGATTCTATGTCCGGGTATTAATCGACCAGCTAGGGGAGAAACTTAACACCGAAGCAGAAATGGAGGAACTCAGAAGAACACAGCAGGCAGGTATCTCAGAAATGGAGACAAACACTTTACAGGAGATAGTCGATGCCTATCATTACTACAATGAAGGTGACGAAGAAGAACTACGTAAAGTTCTCTACCCGATTGAGAAAGCAGTCAGCCACTTGAGAAAAATAGCCATCAAGGATTCCGCTGTAAACGCTGTGGCAAACGGCGCCGACCTAGGAACACAAGGAATATCTAAACTCCAAGACGGCATAACGGAAGGGGAGAGAGTAGCAATCACCACGCTGAAAGGCGAGCTAATAGCGCTCGGAACCGCAGAGATGACATCAGAGCAGATGTTTGACAAAGACGATAAAGCAGCCACTCTAGAATCAGTACATATGAAACCAGAGACATACCCCAAGAGATGGAAACAGTAA
PROTEIN sequence
Length: 302
MKSAKWYTKEEAETDPEFGSIPEERSIEELMEKGIMLVDKPFGPQSNQVSTWIKKELDVKKTGHFGTLDPNATGILPVGLNKGTRGSKAMSKADKEYIFEANLGEGKKKAEIREVLNSFKGVNKQVPPEKSAVKRILGGVKCESGFYVRVLIDQLGEKLNTEAEMEELRRTQQAGISEMETNTLQEIVDAYHYYNEGDEEELRKVLYPIEKAVSHLRKIAIKDSAVNAVANGADLGTQGISKLQDGITEGERVAITTLKGELIALGTAEMTSEQMFDKDDKAATLESVHMKPETYPKRWKQ*