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sw_4_scaffold_631_17

Organism: SW_4_Nanohaloarchaea_43_9

near complete RP 37 / 55 MC: 5 BSCG 22 / 51 ASCG 36 / 38 MC: 3
Location: 12677..13369

Top 3 Functional Annotations

Value Algorithm Source
Exosome complex component Rrp4 n=1 Tax=Candidatus Nanosalina sp. J07AB43 RepID=G0QFQ4_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 57.8
  • Coverage: 230.0
  • Bit_score: 290
  • Evalue 1.90e-75
Exosome complex component Rrp4 {ECO:0000256|HAMAP-Rule:MF_00623}; TaxID=889948 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Nanosalina.;" source="Nanosalina sp. (strain J07AB43).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.8
  • Coverage: 230.0
  • Bit_score: 290
  • Evalue 2.60e-75
putative exosome complex RNA-binding protein 1 similarity KEGG
DB: KEGG
  • Identity: 44.6
  • Coverage: 222.0
  • Bit_score: 206
  • Evalue 9.90e-51

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Taxonomy

Candidatus Nanosalina sp. J07AB43 → Candidatus Nanosalina → Nanohaloarchaea → Nanohaloarchaeota → Archaea

Sequences

DNA sequence
Length: 693
ATGTCACGTGTAAAAGAAGAGAAAGAACTAGTGACACCAGGAGATACCATCTACAGTGGTAATGAACTTTATCCGAACTCTGGTGTATACGAAGAAGACGATAAAATCATTTCAAAATACATAGGAGTTGTAGAATACGGTCAGAACTCTGTAAGAGTCGTCCCCATGTCGGGAAGATACATGCCGGAAGAGGGAGATATCGTCATCGCAGAGATCTCCAGCGTAGGATACAACAACTGGAGAGCAGACCTCAACTCAGCTTACGATGGCATGCTGCGGATTGATGTCGCGGTAGACGAATATATTGATCTGGACGAAGACGATCTAACCGACTACTTTGATGTTGGTGATGCGATTGTTGTAGAAATCTCCAGTGTAACAGCAGGATACGATGTCAATCTCTCAATGGAAGACAAAAGATGTAGAAAACTGAGAGGCGGAAGAATAATCGAGATTTACCATTCAAAAGTTCCAAGAGTAATTGGAAAGAAGGGAACCATGATAAAACAGATTAAAGAAAAAACCGGATGCAAGATAATCGTAGGGCAGAACGGACTTGTCTGGATCCAGGGAGAGAAAGAAAACCTGGCAGCAAAGACAATCAGAAAAATTGAGGAAGAAGCACATGTAGAAGGATTAACGGACAAAATCAGCGATTGGCTTGAGGAACAGCTAGAAGGTGACGCAGAATGA
PROTEIN sequence
Length: 231
MSRVKEEKELVTPGDTIYSGNELYPNSGVYEEDDKIISKYIGVVEYGQNSVRVVPMSGRYMPEEGDIVIAEISSVGYNNWRADLNSAYDGMLRIDVAVDEYIDLDEDDLTDYFDVGDAIVVEISSVTAGYDVNLSMEDKRCRKLRGGRIIEIYHSKVPRVIGKKGTMIKQIKEKTGCKIIVGQNGLVWIQGEKENLAAKTIRKIEEEAHVEGLTDKISDWLEEQLEGDAE*