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sw_4_scaffold_631

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_4_scaffold_631_1
unknown

Not on your lists

comp(3..311)
DNA (309bp) protein (103aa)

This feature has no annotations

sw_4_scaffold_631_2
Candidatus Nanosalinarum sp. J07AB56, Candidatus Nanosalinarum, Nanohaloarchaea, Nanohaloarchaeota, Archaea

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440..3067
DNA (2628bp) protein (876aa)
# 117109 # 118434 # -1 # ;gc_cont=0.567 id=18315927 bin=Nanosalinarum tax=Nanosalinarum
Uncharacterized protein {ECO:0000313|EMBL:EGQ39709.1}; TaxID=889962 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Nanosalinarum.;" source="Nanosalinarum sp. (strain J07AB56).;"
sw_4_scaffold_631_trna_1
unknown

Not on your lists

comp(3103..3176)
DNA (74bp)
transferRNA
sw_4_scaffold_631_3
unknown

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3333..3650
DNA (318bp) protein (106aa)

This feature has no annotations

sw_4_scaffold_631_4
Candidatus Nanosalina sp. J07AB43, Candidatus Nanosalina, Nanohaloarchaea, Nanohaloarchaeota, Archaea

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3610..4365
DNA (756bp) protein (252aa)
dapA; dihydrodipicolinate synthase (EC:4.2.1.52); K01714 dihydrodipicolinate synthase [EC:4.2.1.52] id=18313329 bin=Nanosalina tax=Nanosalina
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418}; Short=HTPA synthase {ECO:0000256|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000256|HAMAP-Rule:MF_00418};; TaxID=889948 species
dihydrodipicolinate synthase (EC:4.2.1.52)
sw_4_scaffold_631_5
unknown

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4362..4532
DNA (171bp) protein (57aa)

This feature has no annotations

sw_4_scaffold_631_6
unknown

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4555..4905
DNA (351bp) protein (117aa)

This feature has no annotations

sw_4_scaffold_631_7
Candidatus Nanosalina sp. J07AB43, Candidatus Nanosalina, Nanohaloarchaea, Nanohaloarchaeota, Archaea

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comp(4964..5368)
DNA (405bp) protein (135aa)
Transcriptional regulator n=1 Tax=Candidatus Nanosalina sp. J07AB43 RepID=G0QIM5_9EURY
Transcriptional regulator {ECO:0000313|EMBL:EGQ43105.1}; TaxID=889948 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Nanosalina.;" source="Nanosalina sp. (strain J07AB43).;"
AsnC family transcriptional regulator
sw_4_scaffold_631_8
Candidatus Nanosalina sp. J07AB43, Candidatus Nanosalina, Nanohaloarchaea, Nanohaloarchaeota, Archaea

Not on your lists

comp(5413..6042)
DNA (630bp) protein (210aa)
Putative phosphoesterase, Icc family n=1 Tax=Candidatus Nanosalina sp. J07AB43 RepID=G0QIM7_9EURY
Putative phosphoesterase, Icc family {ECO:0000313|EMBL:EGQ43107.1}; TaxID=889948 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Nanosalina.;" source="Nanosalina sp. (strain J07AB43).
sw_4_scaffold_631_9
AR15, Woesearchaeaota, DPANN, Archaea

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comp(6087..6410)
DNA (324bp) protein (108aa)
Alkylhydroperoxidase AhpD core id=5799636 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Alkylhydroperoxidase AhpD core Tax=AR15
carboxymuconolactone decarboxylase
sw_4_scaffold_631_10
unknown

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comp(6447..6755)
DNA (309bp) protein (103aa)

This feature has no annotations

sw_4_scaffold_631_11
Pontibacillus marinus, Pontibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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6926..8263
DNA (1338bp) protein (446aa)
aprX2; serine protease AprX (EC:3.4.21.-)
Subtilisin-like serine protease n=1 Tax=Thermoanaerobacter thermohydrosulfuricus WC1 RepID=M8D047_THETY
Peptidase S8 {ECO:0000313|EMBL:KGX89887.1}; TaxID=1385511 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Pontibacillus.;" source="Pontibacillus marinus BH030004 = DSM 16465.;"
sw_4_scaffold_631_12
Candidatus Nanosalinarum sp. J07AB56, Candidatus Nanosalinarum, Nanohaloarchaea, Nanohaloarchaeota, Archaea

Not on your lists

8251..8892
DNA (642bp) protein (214aa)
methionine-R-sulfoxide reductase/methionine-S-sulfoxide reductase id=18315269 bin=Nanosalinarum tax=Nanosalinarum
Methionine-R-sulfoxide reductase {ECO:0000313|EMBL:EGQ40505.1}; TaxID=889962 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Nanosalinarum.;" source="Nanosalinarum sp. (strain J07AB56
methionine-R-sulfoxide reductase/methionine-S-sulfoxide reductase
sw_4_scaffold_631_13
Candidatus Nanosalina sp. J07AB43, Candidatus Nanosalina, Nanohaloarchaea, Nanohaloarchaeota, Archaea

Not on your lists

comp(8996..10354)
DNA (1359bp) protein (453aa)
dihydrolipoamide dehydrogenase (EC:1.8.1.4) id=18314484 bin=Nanosalina tax=Nanosalina
Pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:EGQ43747.1}; TaxID=889948 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Nanosalina.;" source="Nanosalina sp. (strain J
pyridine nucleotide-disulfide oxidoreductase dimerization region
sw_4_scaffold_631_14
Candidatus Haloredivivus sp. G17, Nanohaloarchaea, Nanohaloarchaeota, Archaea

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comp(10436..10786)
DNA (351bp) protein (117aa)
Putative uncharacterized protein n=1 Tax=Candidatus Haloredivivus sp. G17 RepID=H0A943_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EHK02686.1}; TaxID=1072681 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Haloredivivus.;" source="Haloredivivus sp. (strain G17).;"
sw_4_scaffold_631_15
Candidatus Nanosalina sp. J07AB43, Candidatus Nanosalina, Nanohaloarchaea, Nanohaloarchaeota, Archaea

Not on your lists

11084..11785
DNA (702bp) protein (234aa)
psmA; proteasome subunit alpha (EC:3.4.25.1); K03432 proteasome alpha subunit [EC:3.4.25.1] id=18313351 bin=Nanosalina tax=Nanosalina
Proteasome subunit alpha {ECO:0000256|RuleBase:RU000552}; EC=3.4.25.1 {ECO:0000256|RuleBase:RU000552};; TaxID=889948 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Nanosalina.;" sour
proteasome subunit alpha (EC:3.4.25.1)
sw_4_scaffold_631_16
Candidatus Nanosalinarum sp. J07AB56, Candidatus Nanosalinarum, Nanohaloarchaea, Nanohaloarchaeota, Archaea

Not on your lists


11877..12563
DNA (687bp) protein (229aa)
RNA-associated protein; K14574 ribosome maturation protein SDO1 id=18315913 bin=Nanosalinarum species=unknown genus=unknown taxon_order=unknown taxon_class=Nanohaloarchaea phylum=Euryarchaeota tax=Nanosalinarum
Uncharacterized protein {ECO:0000313|EMBL:EGQ39695.1}; TaxID=889962 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Nanosalinarum.;" source="Nanosalinarum sp. (strain J07AB56).;"
ribosome maturation protein SBDS-like protein
sw_4_scaffold_631_17
Candidatus Nanosalina sp. J07AB43, Candidatus Nanosalina, Nanohaloarchaea, Nanohaloarchaeota, Archaea

Not on your lists

12677..13369
DNA (693bp) protein (231aa)
Exosome complex component Rrp4 n=1 Tax=Candidatus Nanosalina sp. J07AB43 RepID=G0QFQ4_9EURY
Exosome complex component Rrp4 {ECO:0000256|HAMAP-Rule:MF_00623}; TaxID=889948 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Nanosalina.;" source="Nanosalina sp. (strain J07AB43).;"
putative exosome complex RNA-binding protein 1
sw_4_scaffold_631_18
Candidatus Nanosalina sp. J07AB43, Candidatus Nanosalina, Nanohaloarchaea, Nanohaloarchaeota, Archaea

Not on your lists

13366..14100
DNA (735bp) protein (245aa)
exosome complex exonuclease Rrp41; K11600 exosome complex component RRP41 id=18313354 bin=Nanosalina tax=Nanosalina
Ribosomal RNA-processing protein RRP41/SKI6 {ECO:0000313|EMBL:EGQ43126.1}; TaxID=889948 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Nanosalina.;" source="Nanosalina sp. (strain J0
exosome complex exonuclease 1
sw_4_scaffold_631_19
Candidatus Nanosalina sp. J07AB43, Candidatus Nanosalina, Nanohaloarchaea, Nanohaloarchaeota, Archaea

Not on your lists

14114..14905
DNA (792bp) protein (264aa)
exosome complex RNA-binding protein Rrp42 (EC:3.1.13.-); K12589 exosome complex component RRP42 id=18313355 bin=Nanosalina tax=Nanosalina
exosome complex RNA-binding protein Rrp42 (EC:3.1.13.-)
Exosome complex component Rrp42 {ECO:0000256|HAMAP-Rule:MF_00622}; TaxID=889948 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Nanosalina.;" source="Nanosalina sp. (strain J07AB43).;
sw_4_scaffold_631_20
Candidatus Nanosalinarum sp. J07AB56, Candidatus Nanosalinarum, Nanohaloarchaea, Nanohaloarchaeota, Archaea

Not on your lists

14950..15234
DNA (285bp) protein (95aa)
50S ribosomal protein L37Ae n=1 Tax=Candidatus Nanosalinarum sp. J07AB56 RepID=G0QBQ1_9EURY
50S ribosomal protein L37Ae {ECO:0000256|HAMAP-Rule:MF_00327}; Ribosomal protein L43e {ECO:0000256|HAMAP-Rule:MF_00327}; TaxID=889962 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus N
sw_4_scaffold_631_21
Candidatus Haloredivivus sp. G17, Nanohaloarchaea, Nanohaloarchaeota, Archaea

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15285..15491
DNA (207bp) protein (69aa)
# 625 # 759 # -1 # ;gc_cont=0.437 id=18311411 bin=Haloredivivus tax=Haloredivivus
Uncharacterized protein {ECO:0000313|EMBL:EHK02363.1}; TaxID=1072681 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Haloredivivus.;" source="Haloredivivus sp. (strain G17).;"
sw_4_scaffold_631_22
Candidatus Nanosalina sp. J07AB43, Candidatus Nanosalina, Nanohaloarchaea, Nanohaloarchaeota, Archaea

Not on your lists

15491..15709
DNA (219bp) protein (73aa)
# 353110 # 353331 # 1 # ;gc_cont=0.455 id=18313358 bin=Nanosalina tax=Nanosalina
Uncharacterized protein {ECO:0000313|EMBL:EGQ43129.1}; TaxID=889948 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Nanosalina.;" source="Nanosalina sp. (strain J07AB43).;"
sw_4_scaffold_631_23
Candidatus Nanosalina sp. J07AB43, Candidatus Nanosalina, Nanohaloarchaea, Nanohaloarchaeota, Archaea

Not on your lists

15714..16043
DNA (330bp) protein (110aa)
Prefoldin subunit beta n=1 Tax=Candidatus Nanosalina sp. J07AB43 RepID=G0QFQ9_9EURY
Prefoldin subunit beta {ECO:0000256|HAMAP-Rule:MF_00307}; GimC subunit beta {ECO:0000256|HAMAP-Rule:MF_00307}; TaxID=889948 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Nanosalina.
hypothetical protein
sw_4_scaffold_631_24
Candidatus Haloredivivus sp. G17, Nanohaloarchaea, Nanohaloarchaeota, Archaea

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16049..16300
DNA (252bp) protein (84aa)
Putative uncharacterized protein n=1 Tax=Candidatus Haloredivivus sp. G17 RepID=H0A9E7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EHK02626.1}; TaxID=1072681 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Haloredivivus.;" source="Haloredivivus sp. (strain G17).;"
hypothetical protein
sw_4_scaffold_631_25
Candidatus Haloredivivus sp. G17, Nanohaloarchaea, Nanohaloarchaeota, Archaea

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16355..16717
DNA (363bp) protein (121aa)
Putative uncharacterized protein n=1 Tax=Candidatus Haloredivivus sp. G17 RepID=H0A9E6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EHK02625.1}; TaxID=1072681 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Haloredivivus.;" source="Haloredivivus sp. (strain G17).;"
hypothetical protein
sw_4_scaffold_631_26
unknown

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16747..17286
DNA (540bp) protein (180aa)

This feature has no annotations

sw_4_scaffold_631_27
Candidatus Nanosalinarum sp. J07AB56, Candidatus Nanosalinarum, Nanohaloarchaea, Nanohaloarchaeota, Archaea

Not on your lists

comp(17289..17546)
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Candidatus Nanosalinarum sp. J07AB56 RepID=G0QBQ7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EGQ39705.1}; TaxID=889962 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Nanosalinarum.;" source="Nanosalinarum sp. (strain J07AB56).;"
sw_4_scaffold_631_28
Candidatus Haloredivivus sp. G17, Nanohaloarchaea, Nanohaloarchaeota, Archaea

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comp(17661..19538)
DNA (1878bp) protein (626aa)
mRNA cleavage/polyadenylation specificity factor, 100 kD subunit; K07041 id=18311092 bin=Haloredivivus tax=Haloredivivus
mRNA cleavage/polyadenylation specificity factor, 100 kD subunit {ECO:0000313|EMBL:EHK02708.1}; TaxID=1072681 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Haloredivivus.;" source="
mRNA cleavage/polyadenylation specificity factor, 100 kD subunit
sw_4_scaffold_631_29
Candidatus Haloredivivus sp. G17, Nanohaloarchaea, Nanohaloarchaeota, Archaea

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comp(19603..20253)
DNA (651bp) protein (217aa)
proteasome endopeptidase complex subunit beta (EC:3.4.25.1); K03433 proteasome beta subunit [EC:3.4.25.1] id=18311093 bin=Haloredivivus tax=Haloredivivus
Proteasome subunit beta {ECO:0000256|HAMAP-Rule:MF_02113}; EC=3.4.25.1 {ECO:0000256|HAMAP-Rule:MF_02113};; 20S proteasome beta subunit {ECO:0000256|HAMAP-Rule:MF_02113}; Proteasome core protein PsmB {
proteasome endopeptidase complex, beta subunit
Displaying items 1-30 of 32 in total

View Taxonomy