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sw_4_scaffold_631_19

Organism: SW_4_Nanohaloarchaea_43_9

near complete RP 37 / 55 MC: 5 BSCG 22 / 51 ASCG 36 / 38 MC: 3
Location: 14114..14905

Top 3 Functional Annotations

Value Algorithm Source
exosome complex RNA-binding protein Rrp42 (EC:3.1.13.-); K12589 exosome complex component RRP42 id=18313355 bin=Nanosalina tax=Nanosalina similarity UNIREF
DB: UNIREF100
  • Identity: 60.2
  • Coverage: 261.0
  • Bit_score: 316
  • Evalue 3.60e-83
exosome complex RNA-binding protein Rrp42 (EC:3.1.13.-) similarity KEGG
DB: KEGG
  • Identity: 45.5
  • Coverage: 257.0
  • Bit_score: 224
  • Evalue 4.00e-56
Exosome complex component Rrp42 {ECO:0000256|HAMAP-Rule:MF_00622}; TaxID=889948 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Nanosalina.;" source="Nanosalina sp. (strain J07AB43).; similarity UNIPROT
DB: UniProtKB
  • Identity: 60.2
  • Coverage: 261.0
  • Bit_score: 316
  • Evalue 5.00e-83

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Taxonomy

Candidatus Nanosalina sp. J07AB43 → Candidatus Nanosalina → Nanohaloarchaea → Nanohaloarchaeota → Archaea

Sequences

DNA sequence
Length: 792
ATGAAACTTAATCAAAAGAAGATTCAGAAGATAGTCAAGGATGGAGAAAGACTTGATGGGAGAGAACTTGATGAGTACAGAGAAATAGAAATCATCCCAGACTACATCAGTGAGACAGCAGCAGGAAGCGCAAAAGTCACAATCGGTGATACACAGGTCGTAATAGGTCTTTCAGTCAGTCTGGAAGAACCATATCCTGACAGACCGGACTCCGGTACAATTGTGACGAACGCAGAACTTGCTCCAATGGCCCACAAAGAATACGAGTCAGGACCACCCCAGGAAGATGGAGTAGAACTCGCAAGAGTCGTTGACAGAGGAATCAGGGAAGCAGAAGCAGTTGACCTTGAAGAGCTATGTATCAAATCAGGAGAGAAAGTAATGACAGTATTCATCGACGCACACATCCTGAACGACGATGGAAGTCTGATTGATGCATGTTCGCTAGCAGCAATGGCTGCACTCAAGACAGGGACACTTCCAGAATACGATGAAGAGACAGACACTCTCAAAAGAGACAATAGGGAAAGAGAAATTCCACTTCAGGAAGAACCAGTAACAGTCACAGCTCACAAGATAAACGGCGAAATAGTCTGGGACACAACAGGAGCAGAGGAAGATGCACAGGGATCAAGACTAACAGTCTCAATTAACGAGCACGAAAACATTGTCGCGATGCAGAAGGGAGAAACCCATCCATTCACACAGCAGGAGATCATGGATATCGTAGACGAAGCAGAGAACAAAACCGGGAAACTACGAGAGCAACTGGAAACTGCGACAGGAGAATAA
PROTEIN sequence
Length: 264
MKLNQKKIQKIVKDGERLDGRELDEYREIEIIPDYISETAAGSAKVTIGDTQVVIGLSVSLEEPYPDRPDSGTIVTNAELAPMAHKEYESGPPQEDGVELARVVDRGIREAEAVDLEELCIKSGEKVMTVFIDAHILNDDGSLIDACSLAAMAALKTGTLPEYDEETDTLKRDNREREIPLQEEPVTVTAHKINGEIVWDTTGAEEDAQGSRLTVSINEHENIVAMQKGETHPFTQQEIMDIVDEAENKTGKLREQLETATGE*