ggKbase home page

sw_4_scaffold_835_24

Organism: SW_4_Nanohaloarchaea_43_9

near complete RP 37 / 55 MC: 5 BSCG 22 / 51 ASCG 36 / 38 MC: 3
Location: 21255..22088

Top 3 Functional Annotations

Value Algorithm Source
Replication factor C small subunit n=1 Tax=Candidatus Nanosalina sp. J07AB43 RepID=G0QH38_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 76.4
  • Coverage: 271.0
  • Bit_score: 430
  • Evalue 1.10e-117
Replication factor C small subunit {ECO:0000256|HAMAP-Rule:MF_01509}; Short=RFC small subunit {ECO:0000256|HAMAP-Rule:MF_01509};; Clamp loader small subunit {ECO:0000256|HAMAP-Rule:MF_01509}; TaxID=88 similarity UNIPROT
DB: UniProtKB
  • Identity: 76.4
  • Coverage: 271.0
  • Bit_score: 430
  • Evalue 1.50e-117
DNA polymerase III, gamma/tau subunit similarity KEGG
DB: KEGG
  • Identity: 59.6
  • Coverage: 265.0
  • Bit_score: 326
  • Evalue 7.90e-87

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Candidatus Nanosalina sp. J07AB43 → Candidatus Nanosalina → Nanohaloarchaea → Nanohaloarchaeota → Archaea

Sequences

DNA sequence
Length: 834
ATGACTGAAATTGATGTCTGGACAGAAAAATACCGGCCTGACACTCTGAGTGAGGTAGTTGGACAGGAGAAAATAGTTGACAGATTAACCTCTTTCGTAGAGGAAGATTCAATTCCTCACCTCATGTTCGCAGGACCCGCAGGAACGGGTAAAACAACATGTGCGATGTCCCTGGCACAGGATCTCTACGGAGATTCATGGCGACAGAACTTTATGGAAACAAACGCCTCCGATGAGAGAGGCATTGATGTTGTCAGGGAGAGAATCAAGGATTTTGCCCGGACAAAGCCGGTCAACGCCGACTACAAGATAATATTCCTGGACGAGGCAGACGCGCTTACACAGGACGCTCAGCAGGCACTGAGGAGGACCATGGAACAGTTCTCTGATAACTGTCGATTTATACTTTCCTGCAATTACTCCTCGAAGATAATCGATCCAATTCAATCACGATGTGCCGTATTCAGGTTCAACCGTCTGGATGATGAAGATGTTGAAAAGTATATTACAAGGATAGCTGAAAATGAAGGATTCAAGATCTCCCGTGAGGCGATTGACGCGGTTCTCAGAGTTTCCGGCGGGGATCTGAGAAGGGTTACTAATGTCCTACAGACAGCTTCCATGACGGAAGACAAGATAGAAGAAGAGGATATCTACGGCGCCTCTGCTTCTCTGAAACCGGATGAGACAGAGGAGATACTCGAGAAAGCTCTAAAAGGCGACTTTATCGACGCCCGTGGACACCTAGCCGATATCATGATTGAAAGAGGACTTGATGGACAGGATGTAATCAACGCAATCCACACGAAGGCGGAACCTCTGATATCCAGATAG
PROTEIN sequence
Length: 278
MTEIDVWTEKYRPDTLSEVVGQEKIVDRLTSFVEEDSIPHLMFAGPAGTGKTTCAMSLAQDLYGDSWRQNFMETNASDERGIDVVRERIKDFARTKPVNADYKIIFLDEADALTQDAQQALRRTMEQFSDNCRFILSCNYSSKIIDPIQSRCAVFRFNRLDDEDVEKYITRIAENEGFKISREAIDAVLRVSGGDLRRVTNVLQTASMTEDKIEEEDIYGASASLKPDETEEILEKALKGDFIDARGHLADIMIERGLDGQDVINAIHTKAEPLISR*