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sw_4_scaffold_835

Search features with annotation key words

Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_4_scaffold_835_1
Candidatus Nanosalina sp. J07AB43, Candidatus Nanosalina, Nanohaloarchaea, Nanohaloarchaeota, Archaea

Not on your lists

comp(1..906)
DNA (906bp) protein (302aa)
Elongation factor 1-alpha n=1 Tax=Candidatus Nanosalina sp. J07AB43 RepID=G0QHP1_9EURY
Elongation factor 1-alpha {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004060}; Short=EF-1-alpha {ECO:0000256|HAMAP-Rule:MF_00118};; Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118};
tef1a; translation elongation factor aEF-1 alpha subunit
sw_4_scaffold_835_2
Candidatus Nanosalinarum sp. J07AB56, Candidatus Nanosalinarum, Nanohaloarchaea, Nanohaloarchaeota, Archaea

Not on your lists

comp(990..2132)
DNA (1143bp) protein (381aa)
group 1 glycosyl transferase id=18315395 bin=Nanosalinarum tax=Nanosalinarum
Glycosyltransferase {ECO:0000313|EMBL:EGQ40625.1}; TaxID=889962 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Nanosalinarum.;" source="Nanosalinarum sp. (strain J07AB56).;"
group 1 glycosyl transferase
sw_4_scaffold_835_3
Candidatus Haloredivivus sp. G17, Nanohaloarchaea, Nanohaloarchaeota, Archaea

Not on your lists

comp(2223..2951)
DNA (729bp) protein (243aa)
Elongation factor 2 {ECO:0000256|SAAS:SAAS00088569}; TaxID=1072681 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Haloredivivus.;" source="Haloredivivus sp. (strain G17).;"
translation elongation factor aEF-2; K03234 elongation factor 2 id=18313109 bin=Haloredivivus tax=Haloredivivus
elongation factor EF-2
sw_4_scaffold_835_4
Candidatus Haloredivivus sp. G17, Nanohaloarchaea, Nanohaloarchaeota, Archaea

Not on your lists

comp(3002..4159)
DNA (1158bp) protein (386aa)
translation elongation factor aEF-2; K03234 elongation factor 2 id=18313109 bin=Haloredivivus tax=Haloredivivus
Elongation factor 2 {ECO:0000256|SAAS:SAAS00088569}; TaxID=1072681 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Haloredivivus.;" source="Haloredivivus sp. (strain G17).;"
translation elongation factor aEF-2
sw_4_scaffold_835_5
Candidatus Nanosalina sp. J07AB43, Candidatus Nanosalina, Nanohaloarchaea, Nanohaloarchaeota, Archaea

Not on your lists


comp(4450..5076)
DNA (627bp) protein (209aa)
30S ribosomal protein S7P id=18314725 bin=Nanosalina tax=Nanosalina
Ribosomal protein S7 {ECO:0000313|EMBL:EGQ42895.1}; TaxID=889948 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Nanosalina.;" source="Nanosalina sp. (strain J07AB43).;"
30S ribosomal protein S7
sw_4_scaffold_835_6
Candidatus Nanosalinarum sp. J07AB56, Candidatus Nanosalinarum, Nanohaloarchaea, Nanohaloarchaeota, Archaea

Not on your lists


comp(5087..5509)
DNA (423bp) protein (141aa)
rps12P; 30S ribosomal protein S12; K02950 small subunit ribosomal protein S12 id=18315387 bin=Nanosalinarum species=unknown genus=unknown taxon_order=unknown taxon_class=Nanohaloarchaea phylum=Euryarchaeota tax=Nanosalinarum
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU004490}; TaxID=889962 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Nanosalinarum.;" source="Nanos
30S ribosomal protein S12
sw_4_scaffold_835_7
Candidatus Haloredivivus sp. G17, Nanohaloarchaea, Nanohaloarchaeota, Archaea

Not on your lists

comp(5597..5962)
DNA (366bp) protein (122aa)
# 171826 # 172143 # 1 # ;gc_cont=0.406 id=18314726 bin=Nanosalina tax=Nanosalina
Uncharacterized protein {ECO:0000313|EMBL:EHK02142.1}; TaxID=1072681 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Haloredivivus.;" source="Haloredivivus sp. (strain G17).;"
sw_4_scaffold_835_8
unknown

Not on your lists

comp(6029..6376)
DNA (348bp) protein (116aa)

This feature has no annotations

sw_4_scaffold_835_9
Fukomys damarensis, Fukomys, Rodentia, Mammalia, Chordata, Metazoa

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comp(6330..7190)
DNA (861bp) protein (287aa)
PREDICTED: uncharacterized protein LOC100909751, partial n=1 Tax=Rattus norvegicus RepID=UPI00026886AD
Spore wall protein 2 {ECO:0000313|EMBL:KFO33423.1}; TaxID=885580 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hyst
hypothetical protein
sw_4_scaffold_835_10
Candidatus Nanosalina sp. J07AB43, Candidatus Nanosalina, Nanohaloarchaea, Nanohaloarchaeota, Archaea

Not on your lists

comp(7257..7544)
DNA (288bp) protein (96aa)
NusA family KH domain protein n=1 Tax=Candidatus Nanosalina sp. J07AB43 RepID=G0QI12_9EURY
NusA family KH domain protein {ECO:0000313|EMBL:EGQ42892.1}; TaxID=889948 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Nanosalina.;" source="Nanosalina sp. (strain J07AB43).;"
NusA family KH domain-containing protein
sw_4_scaffold_835_11
Candidatus Haloredivivus sp. G17, Nanohaloarchaea, Nanohaloarchaeota, Archaea

Not on your lists

comp(8815..9849)
DNA (1035bp) protein (345aa)
DNA-directed RNA polymerase, subunit a' (EC:2.7.7.6); K03041 DNA-directed RNA polymerase subunit A' [EC:2.7.7.6] id=18313117 bin=Haloredivivus species=unknown genus=unknown taxon_order=unknown taxon_class=Nanohaloarchaea phylum=Euryarchaeota tax=Haloredivivus
DNA-directed RNA polymerase {ECO:0000256|RuleBase:RU004279}; EC=2.7.7.6 {ECO:0000256|RuleBase:RU004279};; Flags: Fragment;; TaxID=1072681 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidat
DNA-directed RNA polymerase subunit A' (EC:2.7.7.6)
sw_4_scaffold_835_12
Candidatus Nanosalina sp. J07AB43, Candidatus Nanosalina, Nanohaloarchaea, Nanohaloarchaeota, Archaea

Not on your lists

comp(11208..13010)
DNA (1803bp) protein (601aa)
DNA-directed RNA polymerase subunit B; K03044 DNA-directed RNA polymerase subunit B' [EC:2.7.7.6] id=18314719 bin=Nanosalina tax=Nanosalina
DNA-directed RNA polymerase {ECO:0000256|RuleBase:RU000431}; EC=2.7.7.6 {ECO:0000256|RuleBase:RU000431};; TaxID=889948 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Nanosalina.;" so
DNA-directed RNA polymerase, subunit b' (EC:2.7.7.6)
sw_4_scaffold_835_13
Candidatus Nanosalina sp. J07AB43, Candidatus Nanosalina, Nanohaloarchaea, Nanohaloarchaeota, Archaea

Not on your lists

comp(13093..13980)
DNA (888bp) protein (296aa)
DNA-directed RNA polymerase, subunit b' (EC:2.7.7.6); K03045 DNA-directed RNA polymerase subunit B" [EC:2.7.7.6] id=18314718 bin=Nanosalina tax=Nanosalina
DNA-directed RNA polymerase, beta subunit/140 kD subunit {ECO:0000313|EMBL:EGQ42887.1}; TaxID=889948 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Nanosalina.;" source="Nanosalina s
DNA-directed RNA polymerase, subunit B
sw_4_scaffold_835_14
Candidatus Nanosalina sp. J07AB43, Candidatus Nanosalina, Nanohaloarchaea, Nanohaloarchaeota, Archaea

Not on your lists

comp(14573..14809)
DNA (237bp) protein (79aa)
rpoH; DNA-directed RNA polymerase subunit H (EC:2.7.7.6); K03053 DNA-directed RNA polymerase subunit H [EC:2.7.7.6] id=18314717 bin=Nanosalina tax=Nanosalina
DNA-directed RNA polymerase subunit H {ECO:0000256|HAMAP-Rule:MF_00025}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00025};; TaxID=889948 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Na
RNA polymerase Rpb5 (EC:2.7.7.6)
sw_4_scaffold_835_15
Candidatus Nanosalina sp. J07AB43, Candidatus Nanosalina, Nanohaloarchaea, Nanohaloarchaeota, Archaea

Not on your lists

comp(14946..15611)
DNA (666bp) protein (222aa)
DNA repair protein radc n=1 Tax=Candidatus Nanosalina sp. J07AB43 RepID=G0QI05_9EURY
DNA repair protein radc {ECO:0000313|EMBL:EGQ42885.1}; TaxID=889948 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Nanosalina.;" source="Nanosalina sp. (strain J07AB43).;"
DNA repair protein RadC
sw_4_scaffold_835_16
Candidatus Nanosalina sp. J07AB43, Candidatus Nanosalina, Nanohaloarchaea, Nanohaloarchaeota, Archaea

Not on your lists

15692..16474
DNA (783bp) protein (261aa)
Endonuclease NucS {ECO:0000256|HAMAP-Rule:MF_00722}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00722};; TaxID=889948 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Nanosalina.;" source="
hypothetical protein; K07503 hypothetical protein id=18314715 bin=Nanosalina tax=Nanosalina
hypothetical protein
sw_4_scaffold_835_17
unknown

Not on your lists

comp(16471..16788)
DNA (318bp) protein (106aa)

This feature has no annotations

sw_4_scaffold_835_18
Candidatus Nanosalina sp. J07AB43, Candidatus Nanosalina, Nanohaloarchaea, Nanohaloarchaeota, Archaea

Not on your lists

17074..18669
DNA (1596bp) protein (532aa)
Asparagine synthetase n=1 Tax=Candidatus Nanosalina sp. J07AB43 RepID=G0QI03_9EURY
Asparagine synthase, glutamine-hydrolyzing {ECO:0000313|EMBL:EGQ42883.1}; TaxID=889948 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Nanosalina.;" source="Nanosalina sp. (strain J07
ATP binding protein
sw_4_scaffold_835_19
Candidatus Nanosalina sp. J07AB43, Candidatus Nanosalina, Nanohaloarchaea, Nanohaloarchaeota, Archaea

Not on your lists

18746..18961
DNA (216bp) protein (72aa)
metal-binding-domain/4Fe-4S-binding-domain containing ABC transporter, ATP-binding protein id=18314714 bin=Nanosalina tax=Nanosalina
Asparagine synthase, glutamine-hydrolyzing {ECO:0000313|EMBL:EGQ42883.1}; TaxID=889948 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Nanosalina.;" source="Nanosalina sp. (strain J07
hypothetical protein
sw_4_scaffold_835_20
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18950..19432)
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N3X5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA52632.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_4_scaffold_835_21
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19433..20311)
DNA (879bp) protein (293aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J9G9_HALJB
NAD-dependent epimerase/dehydratase
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:ADJ14381.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalico
sw_4_scaffold_835_22
Candidatus Nanosalina sp. J07AB43, Candidatus Nanosalina, Nanohaloarchaea, Nanohaloarchaeota, Archaea

Not on your lists

20378..20695
DNA (318bp) protein (106aa)
trxA; thioredoxin id=18313806 bin=Nanosalina tax=Nanosalina
Thioredoxin {ECO:0000313|EMBL:EGQ43611.1}; TaxID=889948 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Nanosalina.;" source="Nanosalina sp. (strain J07AB43).;"
thiol-disulfide isomerase
sw_4_scaffold_835_23
Candidatus Nanosalina sp. J07AB43, Candidatus Nanosalina, Nanohaloarchaea, Nanohaloarchaeota, Archaea

Not on your lists

comp(20692..21189)
DNA (498bp) protein (166aa)
Putative adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00039}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00039};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00039};; ATP-AMP transphosphorylase {ECO:0000256|HAMAP-R
Putative adenylate kinase n=1 Tax=Candidatus Nanosalina sp. J07AB43 RepID=G0QH39_9EURY
putative kinase
sw_4_scaffold_835_24
Candidatus Nanosalina sp. J07AB43, Candidatus Nanosalina, Nanohaloarchaea, Nanohaloarchaeota, Archaea

Not on your lists

21255..22088
DNA (834bp) protein (278aa)
Replication factor C small subunit n=1 Tax=Candidatus Nanosalina sp. J07AB43 RepID=G0QH38_9EURY
Replication factor C small subunit {ECO:0000256|HAMAP-Rule:MF_01509}; Short=RFC small subunit {ECO:0000256|HAMAP-Rule:MF_01509};; Clamp loader small subunit {ECO:0000256|HAMAP-Rule:MF_01509}; TaxID=88
DNA polymerase III, gamma/tau subunit
sw_4_scaffold_835_25
Candidatus Nanosalina sp. J07AB43, Candidatus Nanosalina, Nanohaloarchaea, Nanohaloarchaeota, Archaea

Not on your lists

22209..23399
DNA (1191bp) protein (397aa)
Replication factor C large subunit; K04800 replication factor C large subunit id=18313803 bin=Nanosalina tax=Nanosalina
Replication factor C large subunit {ECO:0000256|HAMAP-Rule:MF_01508, ECO:0000256|SAAS:SAAS00009874}; Short=RFC large subunit {ECO:0000256|HAMAP-Rule:MF_01508};; Clamp loader large subunit {ECO:0000256
Replication factor C large subunit
sw_4_scaffold_835_26
Candidatus Nanosalina sp. J07AB43, Candidatus Nanosalina, Nanohaloarchaea, Nanohaloarchaeota, Archaea

Not on your lists

comp(23427..24353)
DNA (927bp) protein (309aa)
Uncharacterized protein n=1 Tax=Candidatus Nanosalina sp. J07AB43 RepID=G0QH36_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EGQ43607.1}; TaxID=889948 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Nanosalina.;" source="Nanosalina sp. (strain J07AB43).;"
sw_4_scaffold_835_27
Candidatus Nanosalinarum sp. J07AB56, Candidatus Nanosalinarum, Nanohaloarchaea, Nanohaloarchaeota, Archaea

Not on your lists

comp(24353..26179)
DNA (1827bp) protein (609aa)
# 359718 # 361268 # -1 # ;gc_cont=0.538 id=18316273 bin=Nanosalinarum tax=Nanosalinarum
Uncharacterized protein {ECO:0000313|EMBL:EGQ40040.1}; TaxID=889962 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Nanosalinarum.;" source="Nanosalinarum sp. (strain J07AB56).;"
sw_4_scaffold_835_28
Candidatus Nanosalina sp. J07AB43, Candidatus Nanosalina, Nanohaloarchaea, Nanohaloarchaeota, Archaea

Not on your lists

comp(26173..27033)
DNA (861bp) protein (287aa)
# 712342 # 713205 # 1 # ;gc_cont=0.436 id=18313800 bin=Nanosalina tax=Nanosalina
Uncharacterized protein {ECO:0000313|EMBL:EGQ43605.1}; TaxID=889948 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Nanosalina.;" source="Nanosalina sp. (strain J07AB43).;"
sw_4_scaffold_835_29
Candidatus Haloredivivus sp. G17, Nanohaloarchaea, Nanohaloarchaeota, Archaea

Not on your lists

comp(27035..28066)
DNA (1032bp) protein (344aa)
Putative uncharacterized protein n=1 Tax=Candidatus Haloredivivus sp. G17 RepID=H0A9H2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EHK02568.1}; TaxID=1072681 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Haloredivivus.;" source="Haloredivivus sp. (strain G17).;"
hypothetical protein
sw_4_scaffold_835_30
Candidatus Haloredivivus sp. G17, Nanohaloarchaea, Nanohaloarchaeota, Archaea

Not on your lists

comp(28073..28879)
DNA (807bp) protein (269aa)
hypothetical protein; K07333 archaeal flagellar protein FlaJ id=18311199 bin=Haloredivivus tax=Haloredivivus
Uncharacterized protein {ECO:0000313|EMBL:EHK02569.1}; TaxID=1072681 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Haloredivivus.;" source="Haloredivivus sp. (strain G17).;"
hypothetical protein
Displaying items 1-30 of 42 in total

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