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sw_4_scaffold_2047

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_4_scaffold_2047_1
R_OD1_Campbellbacteria_35_12, Campbellbacteria, Parcubacteria, Bacteria

Not on your lists


1..321
DNA (321bp) protein (107aa)
LSU ribosomal protein L16P Tax=RIFCSPLOWO2_02_OD1_Campbellbacteria_35_12_curated
rplP; 50S ribosomal protein L16; K02878 large subunit ribosomal protein L16 id=5803318 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
rplP; 50S ribosomal protein L16
sw_4_scaffold_2047_2
GWA2_OD1_47_21_part, Parcubacteria, Bacteria

Not on your lists

337..522
DNA (186bp) protein (62aa)
Uncharacterized protein {ECO:0000313|EMBL:KKU69933.1}; TaxID=1618843 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_47_21.;"
sw_4_scaffold_2047_3
GWF2_OD1_38_76, Parcubacteria, Bacteria

Not on your lists


525..782
DNA (258bp) protein (86aa)
30S ribosomal protein S17 n=1 Tax=Desulfobacter curvatus RepID=UPI000369AF47
Uncharacterized protein {ECO:0000313|EMBL:KKQ81826.1}; TaxID=1618960 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_38_76.;"
30S ribosomal protein S17
sw_4_scaffold_2047_4
GWD1_OD1_35_49, Campbellbacteria, Parcubacteria, Bacteria

Not on your lists


793..1164
DNA (372bp) protein (124aa)
rplN; 50S ribosomal protein L14; K02874 large subunit ribosomal protein L14 id=5803321 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
50S ribosomal protein L14 {ECO:0000313|EMBL:KKP79397.1}; TaxID=1618631 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Campbellbacteria) bacterium GW2011_GWD1_35_49.;"
rplN; 50S ribosomal protein L14
sw_4_scaffold_2047_5
Atopobium sp. oral taxon 810, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists


1181..1477
DNA (297bp) protein (99aa)
50S ribosomal protein L24 n=1 Tax=Atopobium sp. oral taxon 810 str. F0209 RepID=U1WQN4_9ACTN
50S ribosomal protein L24 {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=1321773 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. oral ta
50S ribosomal protein L24
sw_4_scaffold_2047_6
GWE1_OD1_40_20, Parcubacteria, Bacteria

Not on your lists


1495..2049
DNA (555bp) protein (185aa)
50S ribosomal protein L5 n=1 Tax=Parcubacteria bacterium SCGC AAA040-L21 RepID=UPI0003608887
50S ribosomal protein L5 Tax=GWE1_OD1_40_20
50S ribosomal protein L5
sw_4_scaffold_2047_7
Halothermothrix orenii, Halothermothrix, Halanaerobiales, Clostridia, Firmicutes, Bacteria

Not on your lists


2150..2335
DNA (186bp) protein (62aa)
30S ribosomal protein S14 type Z n=1 Tax=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) RepID=RS14Z_HALOH
30S ribosomal protein S14
30S ribosomal protein S14 type Z {ECO:0000255|HAMAP-Rule:MF_01364}; TaxID=373903 species="Bacteria; Firmicutes; Clostridia; Halanaerobiales; Halanaerobiaceae; Halothermothrix.;" source="Halothermothri
sw_4_scaffold_2047_8
R_OD1_Kaiserbacteria_51_13, Kaiserbacteria, Parcubacteria, Bacteria

Not on your lists


2380..2778
DNA (399bp) protein (133aa)
30S ribosomal protein S8 n=1 Tax=Parcubacteria bacterium SCGC AAA040-L21 RepID=UPI000374CAD0
SSU ribosomal protein S8P Tax=RIFCSPLOWO2_02_FULL_OD1_Kaiserbacteria_51_13_curated
30S ribosomal protein S8
sw_4_scaffold_2047_9
R_RIF_OD1_09_51_11, RIF-OD1-9, Parcubacteria, Bacteria

Not on your lists


2812..3348
DNA (537bp) protein (179aa)
50S ribosomal protein L6; K02933 large subunit ribosomal protein L6 Tax=RIFCSPLOWO2_02_FULL_RIF_OD1_09_51_11_curated
50S ribosomal protein L6 id=3423188 bin=GWA1_ZB2_49_26 species=Thermosediminibacter oceani genus=Thermosediminibacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
ribosomal protein L6, bacterial type
sw_4_scaffold_2047_10
Planomicrobium glaciei, Planomicrobium, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


3367..3720
DNA (354bp) protein (118aa)
50S ribosomal protein L18 n=1 Tax=Paenisporosarcina sp. TG-14 RepID=UPI0002E1E39D
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=1273538 species="Bacteria; Firmicutes; Bacilli; Bacillales; Planococcaceae; Planomicrobium.;" source="Planomicrobium glaciei CHR43.;"
rplR; 50S ribosomal protein L18
sw_4_scaffold_2047_11
Parcubacteria bacterium RAAC4_OD1_1, Parcubacteria, Bacteria

Not on your lists


4430..4654
DNA (225bp) protein (75aa)
50S ribosomal protein L15 id=5227336 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341, ECO:0000256|RuleBase:RU003889}; TaxID=1394712 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium RAAC4_OD1_1.;"
sw_4_scaffold_2047_12
R_RIF_OD1_11_46_22, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists


4670..5263
DNA (594bp) protein (198aa)
preprotein translocase subunit SecY; K03076 preprotein translocase subunit SecY Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_11_46_22_curated
Protein translocase subunit SecY id=4817344 bin=GWC2_ACD39_50_8 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=GWC2_ACD39_50_8 organism_group=ACD39
preprotein translocase subunit SecY
Displaying 12 items

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