ggKbase home page

sw_4_scaffold_2773_6

Organism: SW_4_Parcubacteria_46_8

partial RP 33 / 55 MC: 1 BSCG 35 / 51 MC: 4 ASCG 7 / 38 MC: 2
Location: comp(4234..5268)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein Tax=RifOxyC12_full_RIF_OD1_09_46_25_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 54.5
  • Coverage: 341.0
  • Bit_score: 395
  • Evalue 8.60e-107
Winged helix-turn-helix transcription repressor DNA-binding id=5803536 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome similarity UNIREF
DB: UNIREF100
  • Identity: 49.6
  • Coverage: 343.0
  • Bit_score: 372
  • Evalue 5.50e-100
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 32.3
  • Coverage: 344.0
  • Bit_score: 181
  • Evalue 3.90e-43

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RifOxyC12_full_RIF_OD1_09_46_25_curated → RIF-OD1-9 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 1035
ATGAGTAAACTACAGTTTACACCACAACATATAACGAAGCGTCTCATATCTGATCTGCCCGATCGGGCGAAGGATGTGATTATTAAGCGCTACGCACTTGGTGATAAAGATGAAATTATGACGCTTGAGGCCATCGGTAATATGTACGATATTACCCGCGAGCGTGTGCGGCAGATTCAGGAGCATGCGTTAGATACGATTCGCGAGTCCGAGTATGCCAACGAGGCACAGGGTCACTTTGATGAGCTTCGCGATGTGCTCCATGAGTTGGGGGTGATCGTACCCGAGCACTCTTTCTTAACTCATGTGCATGATGACGAGGAGAGCCGGAAACACACGTATCTTTTGCTAGAAGTCGGTGATCACTTCACGCGCCATAAAGAGAATGATAACTTCACACACCGCTGGCATATTGATGAAAAAACGGCAGAGTCTGTTCATGACGCGCTCCACCAGCTTCACGATAATGTAGAGATGGACGAGCTCGTCTCCGAAGAAGAAATACTGGATCGATTCACGTCGGTGCTTGATACATCGCATCCGGATCATGAAAACGACGAGGATGTGCTTTTGCGCTGGCTGGATCTCTCAAAGGTAGTTGATGAAAATCCGCTTGGTGAGTGGGGATTGGCTGAGTCACCGAATGTGAGTGTAAAAGGTATGCGTGATTACGCGTACTTGGTCATTCGTGAGCACGGAAGCCCGATGCACTTTACCGAGGTCACTGAAAAGATTGAGGAGTCGTTTGACAAGCAGGCGCATGTTGCCACGTGCCATAATGAGCTTATCAAGGACGATAGGTTCGTGCTTGTCGGACGTGGGTTGTATGCTCTGAAAGAATGGGGCTATATGACCGGTGTGGTGCGGGATGTGATCCGCAAGCTCATTGAAGAGCACGGTCCAATGGAAAAAGATGAGATAGTTGATAGGGTGCTCAAAGAGCGGTATGTGAAGAAAAACACGGTGATCGTAAACCTGCAGGATACTGACCATTTTCGGCAGCGCGATGACGGCAAATACGAGGTCGCTAAATAA
PROTEIN sequence
Length: 345
MSKLQFTPQHITKRLISDLPDRAKDVIIKRYALGDKDEIMTLEAIGNMYDITRERVRQIQEHALDTIRESEYANEAQGHFDELRDVLHELGVIVPEHSFLTHVHDDEESRKHTYLLLEVGDHFTRHKENDNFTHRWHIDEKTAESVHDALHQLHDNVEMDELVSEEEILDRFTSVLDTSHPDHENDEDVLLRWLDLSKVVDENPLGEWGLAESPNVSVKGMRDYAYLVIREHGSPMHFTEVTEKIEESFDKQAHVATCHNELIKDDRFVLVGRGLYALKEWGYMTGVVRDVIRKLIEEHGPMEKDEIVDRVLKERYVKKNTVIVNLQDTDHFRQRDDGKYEVAK*