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sw_4_scaffold_2773

Search features with annotation key words

Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_4_scaffold_2773_1
RHI_RIF_OD1_10_44_12b, RIF-OD1-1, Parcubacteria, Bacteria

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comp(1..375)
DNA (375bp) protein (125aa)
gyrA; DNA gyrase subunit A (EC:5.99.1.3) Tax=RIFCSPHIGHO2_12_FULL_RIF_OD1_10_44_12b_curated
id=5227153 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
DNA gyrase subunit A
sw_4_scaffold_2773_2
unknown

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comp(491..832)
DNA (342bp) protein (114aa)

This feature has no annotations

sw_4_scaffold_2773_3
R_OD1_Yanofskybacteria_44_12, Yanofskybacteria, Parcubacteria, Bacteria

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comp(864..1490)
DNA (627bp) protein (209aa)
Zn-dependent hydrolase Tax=RIFCSPHIGHO2_02_FULL_OD1_Yanofskybacteria_44_12_curated
id=5803530 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
sw_4_scaffold_2773_4
R_RIF_OD1_11_46_22b, RIF-OD1-11, Parcubacteria, Bacteria

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comp(1737..2798)
DNA (1062bp) protein (354aa)
aminodeoxychorismate lyase; K07082 UPF0755 protein Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_11_46_22b_curated
aminodeoxychorismate lyase; K07082 UPF0755 protein id=5803534 bin=OD1_GWC2_34_28 species=Thermosinus carboxydivorans genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
aminodeoxychorismate lyase
sw_4_scaffold_2773_5
R_OD1_Kaiserbacteria_49_13, Kaiserbacteria, Parcubacteria, Bacteria

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comp(2808..4079)
DNA (1272bp) protein (424aa)
transmembrane_regions Tax=RIFCSPHIGHO2_01_FULL_OD1_Kaiserbacteria_49_13_curated
transmembrane_regions id=5803535 bin=OD1_GWC2_34_28 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
sw_4_scaffold_2773_6
RifOxyC12_full_RIF_OD1_09_46_25_curated, RIF-OD1-9, Parcubacteria, Bacteria

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comp(4234..5268)
DNA (1035bp) protein (345aa)
hypothetical protein Tax=RifOxyC12_full_RIF_OD1_09_46_25_curated
Winged helix-turn-helix transcription repressor DNA-binding id=5803536 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
hypothetical protein
Displaying 6 items

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