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sw_4_scaffold_1251

Search features with annotation key words

Displaying 13 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_4_scaffold_1251_1
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(90..1010)
DNA (921bp) protein (307aa)
50S ribosomal protein L2 n=1 Tax=Salisaeta longa RepID=UPI0003B791FF
rplB; 50S ribosomal protein L2
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320, ECO:0000313|EMBL:CBH24160.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinib
sw_4_scaffold_1251_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


comp(1028..1327)
DNA (300bp) protein (100aa)
50S ribosomal protein L23 n=2 Tax=Salinibacter ruber RepID=D5H804_SALRM
rplW; 50S ribosomal protein L23
50S ribosomal protein L23 {ECO:0000256|HAMAP-Rule:MF_01369}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacte
sw_4_scaffold_1251_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


comp(1403..2032)
DNA (630bp) protein (210aa)
50S ribosomal protein L4 n=1 Tax=Salisaeta longa RepID=UPI0003B69FCC
rplD; 50S ribosomal protein L4
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter
sw_4_scaffold_1251_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


comp(2115..2753)
DNA (639bp) protein (213aa)
50S ribosomal protein L3 n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H802_SALRM
rplC; 50S ribosomal protein L3
50S ribosomal protein L3 {ECO:0000256|HAMAP-Rule:MF_01325, ECO:0000256|RuleBase:RU003906}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salin
sw_4_scaffold_1251_5
unknown

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comp(2851..3372)
DNA (522bp) protein (174aa)

This feature has no annotations

sw_4_scaffold_1251_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


comp(3402..3713)
DNA (312bp) protein (104aa)
30S ribosomal protein S10 n=1 Tax=Salisaeta longa RepID=UPI0003B475B2
rpsJ; 30S ribosomal protein S10
30S ribosomal protein S10 {ECO:0000255|HAMAP-Rule:MF_00508}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacte
sw_4_scaffold_1251_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(3827..4741)
DNA (915bp) protein (305aa)
elongation factor Tu n=1 Tax=Salisaeta longa RepID=UPI0003B38A18
tufA; translation elongation factor Tu (EF-Tu)
Elongation factor Tu {ECO:0000255|HAMAP-Rule:MF_00118}; Short=EF-Tu {ECO:0000255|HAMAP-Rule:MF_00118};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodother
sw_4_scaffold_1251_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(5075..7183)
DNA (2109bp) protein (703aa)
elongation factor P n=1 Tax=Salisaeta longa RepID=UPI0003B6E354
Elongation factor G {ECO:0000256|HAMAP-Rule:MF_00054}; Short=EF-G {ECO:0000256|HAMAP-Rule:MF_00054};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodotherma
fusA; translation elongation factor G (EF-G)
sw_4_scaffold_1251_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


comp(7298..7765)
DNA (468bp) protein (156aa)
30S ribosomal protein S7 n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=RS7_SALRD
30S ribosomal protein S7
30S ribosomal protein S7 {ECO:0000255|HAMAP-Rule:MF_00480}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter
sw_4_scaffold_1251_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


comp(7862..8236)
DNA (375bp) protein (125aa)
30S ribosomal protein S12 n=1 Tax=Salisaeta longa RepID=UPI0003B6FBB0
rpsL; 30S ribosomal protein S12
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU003623}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Sali
sw_4_scaffold_1251_11
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(8649..10079)
DNA (1431bp) protein (477aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000255|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000255|HAMAP-Rule:MF_01458};; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incert
ATP-dependent zinc metalloprotease FtsH n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=FTSH_RHOM4
ATP-dependent metalloprotease FtsH
sw_4_scaffold_1251_12
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(10046..10654)
DNA (609bp) protein (203aa)
ATP-dependent metalloprotease FtsH (EC:3.6.4.3)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incert
ATP-dependent zinc metalloprotease FtsH n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SFD4_RHOMR
sw_4_scaffold_1251_13
Algoriphagus machipongonensis, Algoriphagus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(10944..11591)
DNA (648bp) protein (216aa)
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI0003745073
Uncharacterized protein {ECO:0000313|EMBL:EAZ83210.1}; TaxID=388413 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Algoriphagus.;" source="Algoriphagus machipongonensis
Na+/solute symporter
Displaying 13 items

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