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sw_4_scaffold_188

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Displaying 17 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_4_scaffold_188_1
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(1..702)
DNA (702bp) protein (234aa)
Cysteine desulfurase {ECO:0000313|EMBL:CBH24294.1}; EC=2.8.1.7 {ECO:0000313|EMBL:CBH24294.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; S
Cysteine desulfurase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H8D9_SALRM
sufS; cysteine desulfurase
sw_4_scaffold_188_2
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(747..1961)
DNA (1215bp) protein (405aa)
DNA protecting protein DprA n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SK55_RHOMR
DNA protecting protein DprA
DNA protecting protein DprA {ECO:0000313|EMBL:AEN72811.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus
sw_4_scaffold_188_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(2052..3074)
DNA (1023bp) protein (341aa)
obgE; GTPase ObgE
obgE; GTPase ObgE; K03979 GTP-binding protein id=24659130 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
GTPase Obg {ECO:0000255|HAMAP-Rule:MF_01454}; GTP-binding protein Obg {ECO:0000255|HAMAP-Rule:MF_01454}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothe
sw_4_scaffold_188_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

3245..3721
DNA (477bp) protein (159aa)
Ribonuclease H {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437}; Short=RNase H {ECO:0000256|HAMAP-Rule:MF_00042};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00
RNase H n=1 Tax=Salisaeta longa RepID=UPI0003B672EF
rnhA; ribonuclease HI
sw_4_scaffold_188_5
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

4023..4484
DNA (462bp) protein (154aa)
Heat shock protein Hsp20 n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SI33_RHOMR
heat shock protein Hsp20
Heat shock protein Hsp20 {ECO:0000313|EMBL:AEN73791.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus mar
sw_4_scaffold_188_6
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

4714..5376
DNA (663bp) protein (221aa)
NUDIX hydrolase n=1 Tax=Salisaeta longa RepID=UPI0003B39127
NUDIX hydrolase
NUDIX hydrolase {ECO:0000313|EMBL:AEN73795.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus marinus SG0.
sw_4_scaffold_188_7
Haloarcula sp. CBA1115, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5430..6287)
DNA (858bp) protein (286aa)
chemotaxis protein CheY
Chemotaxis protein CheY {ECO:0000313|EMBL:AJF27142.1}; TaxID=1592728 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sp. CBA1115.;"
pas/pac sensor protein id=4610784 bin=GWF2_Bacteroidetes_33_38 species=Anaerophaga thermohalophila genus=Anaerophaga taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_38 organism_group=Bacteroidetes organism_desc=a699
sw_4_scaffold_188_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(6614..8758)
DNA (2145bp) protein (715aa)
sensory box histidine kinase/response regulator (EC:2.7.3.-)
Sensory box histidine kinase/response regulator {ECO:0000313|EMBL:CBH22851.1}; EC=2.7.3.- {ECO:0000313|EMBL:CBH22851.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incerta
Sensory box histidine kinase/response regulator n=1 Tax=Salinibacter ruber (strain M8) RepID=D6CW22_SALRM
sw_4_scaffold_188_9
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(8872..9330)
DNA (459bp) protein (153aa)
Fe-S metabolism protein SufE n=1 Tax=Salisaeta longa RepID=UPI0003B66E19
Fe-S metabolism associated SufE
Fe-S metabolism associated SufE {ECO:0000313|EMBL:AEN73796.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodother
sw_4_scaffold_188_10
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(9439..10305)
DNA (867bp) protein (289aa)
thiosulfate sulfurtransferase n=1 Tax=Salisaeta longa RepID=UPI0003B5190E
rhodanese domain-containing protein
Sulfurtransferase {ECO:0000256|RuleBase:RU000507}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus marinus
sw_4_scaffold_188_11
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

10875..12740
DNA (1866bp) protein (622aa)
Glycoside hydrolase 15-related protein n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MHB8_RHOM4
glycoside hydrolase 15-like protein
Glycoside hydrolase 15-related protein {ECO:0000313|EMBL:ACY47876.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rh
sw_4_scaffold_188_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(12878..13597)
DNA (720bp) protein (240aa)
otsB; trehalose-phosphatase; K01087 trehalose 6-phosphate phosphatase [EC:3.1.3.12] id=24657418 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Trehalose 6-phosphate phosphatase {ECO:0000256|RuleBase:RU361117}; EC=3.1.3.12 {ECO:0000256|RuleBase:RU361117};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis;
otsB; trehalose-phosphatase
sw_4_scaffold_188_13
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(13712..15184)
DNA (1473bp) protein (491aa)
Trehalose-6-phosphate synthase domain, putative {ECO:0000313|EMBL:CBH23581.1}; EC=2.4.1.15 {ECO:0000313|EMBL:CBH23581.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incert
alpha,alpha-trehalose-phosphate synthase n=1 Tax=Salisaeta longa RepID=UPI0003B68483
otsA; Trehalose-6-phosphate synthase domain
sw_4_scaffold_188_14
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(15528..16400)
DNA (873bp) protein (291aa)
Uncharacterized protein n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SJC9_RHOMR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACY47873.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus mari
sw_4_scaffold_188_trna_1
unknown

Not on your lists

comp(16852..16937)
DNA (86bp)
transferRNA
sw_4_scaffold_188_15
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

17191..18498
DNA (1308bp) protein (436aa)
3-ketoacyl-CoA thiolase {ECO:0000313|EMBL:CBH24573.1}; EC=2.3.1.16 {ECO:0000313|EMBL:CBH24573.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermacea
acetyl-CoA acetyltransferase n=1 Tax=Salisaeta longa RepID=UPI0003B60ACC
fadA; 3-ketoacyl-CoA thiolase
sw_4_scaffold_188_16
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

18583..20634
DNA (2052bp) protein (684aa)
crotonase n=1 Tax=Salisaeta longa RepID=UPI0003B3F7FF
yfcX; fatty oxidation complex subunit alpha
Fatty oxidation complex, alpha subunit {ECO:0000313|EMBL:ABC44573.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Sa
Displaying 17 items

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