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sw_4_scaffold_214

Search features with annotation key words

Displaying 28 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_4_scaffold_214_1
Hymenobacter sp. APR13, Hymenobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(3..398)
DNA (396bp) protein (132aa)
Putative membrane protein/domain protein n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KLS0_SOLCM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AII52993.1}; TaxID=1356852 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Hymenobacter.;" source="Hymenobacter sp. APR13.;"
sw_4_scaffold_214_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(487..2592)
DNA (2106bp) protein (702aa)
Arginine deiminase {ECO:0000313|EMBL:CBH23763.1}; EC=3.5.3.6 {ECO:0000313|EMBL:CBH23763.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Sal
Arginine deiminase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H6V8_SALRM
arcA; Arginine deiminase
sw_4_scaffold_214_3
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(2644..4977)
DNA (2334bp) protein (778aa)
Surface antigen (D15) n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SGT3_RHOMR
surface antigen (D15)
Surface antigen (D15) {ECO:0000313|EMBL:AEN74080.1}; Flags: Precursor;; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="
sw_4_scaffold_214_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(5226..6398)
DNA (1173bp) protein (391aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B55CA1
yihY; YihY family protein
YihY family protein {ECO:0000313|EMBL:CBH24373.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (s
sw_4_scaffold_214_5
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(6524..7885)
DNA (1362bp) protein (454aa)
ATP-dependent Clp protease ATP-binding subunit ClpX n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SGT5_RHOMR
ATP-dependent Clp protease ATP-binding subunit clpX
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000256|HAMAP-Rule:MF_00175, ECO:0000256|SAAS:SAAS00063387}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae se
sw_4_scaffold_214_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

8583..9074
DNA (492bp) protein (164aa)
AsnC family transcriptional regulator n=1 Tax=Salisaeta longa RepID=UPI0003B61EF8
AsnC family transcriptional regulator
Putative AsnC-family transcriptional regulator {ECO:0000313|EMBL:CBH23381.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" so
sw_4_scaffold_214_7

Not on your lists

9159..10664
DNA (1506bp) protein (502aa)
L-glutamine synthetase (EC:6.3.1.2)
Glutamine synthetase, type I n=1 Tax=Planctomyces maris DSM 8797 RepID=A6CAR3_9PLAN
Uncharacterized protein {ECO:0000313|EMBL:KKM55571.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
sw_4_scaffold_214_8
unknown

Not on your lists

comp(10894..11400)
DNA (507bp) protein (169aa)

This feature has no annotations

sw_4_scaffold_214_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(11590..11934)
DNA (345bp) protein (115aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B4F90D
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24353.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_4_scaffold_214_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

12216..13817
DNA (1602bp) protein (534aa)
Peptidase M16 inactive domain family {ECO:0000313|EMBL:CBH24354.1}; EC=3.4.24.- {ECO:0000313|EMBL:CBH24354.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; R
Peptidase M16 inactive domain family n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H8J9_SALRM
peptidase M16 inactive domain family
sw_4_scaffold_214_11
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

13909..16134
DNA (2226bp) protein (742aa)
Zinc protease n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H8K0_SALRM
zinc protease
Zinc protease {ECO:0000313|EMBL:CBH24355.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (strain
sw_4_scaffold_214_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(16230..17018)
DNA (789bp) protein (263aa)
polyhydroxyalkanoate granule-associated protein PhaF n=1 Tax=Salisaeta longa RepID=UPI0003B5BBC2
phaF; poly(hydroxyalcanoate) granule associated protein
Poly(Hydroxyalcanoate) granule associated protein {ECO:0000313|EMBL:CBH25971.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;"
sw_4_scaffold_214_13
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(17191..18381)
DNA (1191bp) protein (397aa)
hydroxyglutarate oxidase n=1 Tax=Salisaeta longa RepID=UPI0003B75A2F
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH25901.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_4_scaffold_214_14
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18507..18866)
DNA (360bp) protein (120aa)
Capsule biosynthesis protein n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9PM67_9DELT
Capsule biosynthesis protein {ECO:0000313|EMBL:EPX64091.1}; TaxID=1242864 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" sourc
capsule biosynthesis protein, capa family
sw_4_scaffold_214_15
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18818..19567)
DNA (750bp) protein (250aa)
Capsule biosynthesis protein n=1 Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2TTK3_9DELT
Capsule biosynthesis protein {ECO:0000313|EMBL:KFE68535.1}; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" source=
capsule biosynthesis protein, capa family
sw_4_scaffold_214_16
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

19743..20822
DNA (1080bp) protein (360aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2RYX2_SALRD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC45350.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_4_scaffold_214_17
unknown

Not on your lists

comp(20835..20963)
DNA (129bp) protein (43aa)

This feature has no annotations

sw_4_scaffold_214_18
[Bacillus] selenitireducens, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(20965..21246)
DNA (282bp) protein (94aa)
Uncharacterized protein {ECO:0000313|EMBL:ADI00174.1}; TaxID=439292 species="Bacteria; Firmicutes; Bacilli; Bacillales; Sporolactobacillaceae; unclassified Sporolactobacillaceae.;" source="Bacillus se
sw_4_scaffold_214_19
unknown

Not on your lists

comp(21435..21602)
DNA (168bp) protein (56aa)

This feature has no annotations

sw_4_scaffold_214_20
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

21620..25210
DNA (3591bp) protein (1197aa)
Chromosome partition protein Smc n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S457_SALRD
smc; chromosome segregation protein SMC
Chromosome partition protein Smc {ECO:0000256|HAMAP-Rule:MF_01894}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Sali
sw_4_scaffold_214_21
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(25296..25604)
DNA (309bp) protein (103aa)
hypothetical protein
hypothetical protein id=24657628 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH23852.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_4_scaffold_214_22
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

25890..26102
DNA (213bp) protein (71aa)
hypothetical protein id=24657627 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH23853.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_4_scaffold_214_23
Rivularia sp. PCC 7116, Rivularia, Nostocales, Cyanobacteria, Bacteria

Not on your lists

26394..27479
DNA (1086bp) protein (362aa)
Uncharacterized protein n=1 Tax=Rivularia sp. PCC 7116 RepID=K9RE25_9CYAN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFY55733.1}; TaxID=373994 species="Bacteria; Cyanobacteria; Nostocales; Rivulariaceae; Rivularia.;" source="Rivularia sp. PCC 7116.;"
sw_4_scaffold_214_24
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

27763..29457
DNA (1695bp) protein (565aa)
Alpha-L-arabinofuranosidase C-terminal domain family n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JLB6_9BACT
alpha-L-arabinofuranosidase domain protein
Alpha-L-arabinofuranosidase domain protein {ECO:0000313|EMBL:AHG92651.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
sw_4_scaffold_214_25
Verrucomicrobiae bacterium DG1235, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

29483..31213
DNA (1731bp) protein (577aa)
Alpha-L-arabinofuranosidase C-terminal domain family n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JLB6_9BACT
Alpha-L-arabinofuranosidase C-terminal domain family {ECO:0000313|EMBL:EDY85258.1}; TaxID=382464 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales.;" source="Verrucomicrobiae ba
alpha-L-arabinofuranosidase domain protein
sw_4_scaffold_214_26
Haliangium ochraceum, Haliangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31291..32343)
DNA (1053bp) protein (351aa)
Uncharacterized protein n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LYG9_HALO1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACY17835.1}; TaxID=502025 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Kofleriaceae; Haliangium.;" source="Haliangium
sw_4_scaffold_214_27
unknown

Not on your lists

32591..32788
DNA (198bp) protein (66aa)

This feature has no annotations

sw_4_scaffold_214_28
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(32967..33263)
DNA (297bp) protein (99aa)
glycine betaine ABC transporter glycine betaine-binding protein
glycine betaine ABC transporter glycine betaine-binding protein; K02002 glycine betaine/proline transport system substrate-binding protein id=24657283 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Glycine betaine ABC transporter glycine betaine-binding protein {ECO:0000313|EMBL:CBH23431.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; S
Displaying 28 items

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