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sw_4_scaffold_3012

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Displaying 18 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_4_scaffold_3012_1
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

3..560
DNA (558bp) protein (186aa)
phosphoribosylformylglycinamidine synthase 2 (EC:6.3.5.3)
Phosphoribosylformylglycinamidine synthase subunit PurL {ECO:0000256|HAMAP-Rule:MF_00420}; Short=FGAM synthase {ECO:0000256|HAMAP-Rule:MF_00420};; EC=6.3.5.3 {ECO:0000256|HAMAP-Rule:MF_00420};; Formyl
Phosphoribosylformylglycinamidine synthase 2 n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SEB7_RHOMR
sw_4_scaffold_3012_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(754..1608)
DNA (855bp) protein (285aa)
hypothetical protein n=1 Tax=Oscillatoria sp. PCC 10802 RepID=UPI00034D0F89
PhzF family phenazine biosynthesis protein; K06998 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
putative isomerase
sw_4_scaffold_3012_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

2054..2398
DNA (345bp) protein (115aa)
trxA; Thioredoxin
trx; thioredoxin; K03671 thioredoxin 1 id=24658605 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077, ECO:0000313|EMBL:CBH25795.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source
sw_4_scaffold_3012_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

2464..3537
DNA (1074bp) protein (358aa)
Thioredoxin reductase {ECO:0000256|RuleBase:RU003881}; EC=1.8.1.9 {ECO:0000256|RuleBase:RU003881};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermace
thioredoxin reductase n=1 Tax=Salisaeta longa RepID=UPI0003B71F8D
trxB; thioredoxin-disulfide reductase
sw_4_scaffold_3012_5
Enterococcus caccae, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

3660..4649
DNA (990bp) protein (330aa)
N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28)
Uncharacterized protein n=1 Tax=Enterococcus caccae ATCC BAA-1240 RepID=R3U4Z7_9ENTE
Uncharacterized protein {ECO:0000313|EMBL:EOL49019.1}; TaxID=1158612 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus caccae ATCC BAA-1240
sw_4_scaffold_3012_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(4754..6199)
DNA (1446bp) protein (482aa)
ATP-dependent RNA helicase; K05592 ATP-dependent RNA helicase DeaD [EC:3.6.4.13] id=24656854 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
ATP-dependent RNA helicase
ATP-dependent RNA helicase {ECO:0000313|EMBL:ABC46146.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter r
sw_4_scaffold_3012_7
Marinobacter nanhaiticus, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6484..7725
DNA (1242bp) protein (414aa)
methionine-R-sulfoxide reductase (EC:1.8.4.11)
Bifunctional peptide methionine sulfoxide reductase MsrA/peptide methionine sulfoxide reductase MsrB n=1 Tax=Marinobacter nanhaiticus D15-8W RepID=N6VXI2_9ALTE
Bifunctional peptide methionine sulfoxide reductase MsrA/peptide methionine sulfoxide reductase MsrB {ECO:0000313|EMBL:ENO14975.1}; TaxID=626887 species="Bacteria; Proteobacteria; Gammaproteobacteria;
sw_4_scaffold_3012_8
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(7824..8474)
DNA (651bp) protein (217aa)
3-oxoacyl-(Acyl-carrier-protein) reductase n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MH80_RHOM4
3-oxoacyl-ACP reductase
3-oxoacyl-(Acyl-carrier-protein) reductase {ECO:0000313|EMBL:ACY49669.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source
sw_4_scaffold_3012_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(8417..9364)
DNA (948bp) protein (316aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H4K8_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH22963.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_4_scaffold_3012_10
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(9458..10012)
DNA (555bp) protein (185aa)
Malonyl CoA-acyl carrier protein transacylase {ECO:0000256|PIRNR:PIRNR000446}; EC=2.3.1.39 {ECO:0000256|PIRNR:PIRNR000446};; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Ince
ACP S-malonyltransferase n=1 Tax=Salisaeta longa RepID=UPI0003B59810
malonyl CoA-acyl carrier protein transacylase
sw_4_scaffold_3012_11
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(10431..10637)
DNA (207bp) protein (69aa)
3-oxoacyl-ACP synthase (EC:2.3.1.41)
3-oxoacyl-[acyl-carrier-protein] synthase 3 {ECO:0000256|HAMAP-Rule:MF_01815}; EC=2.3.1.180 {ECO:0000256|HAMAP-Rule:MF_01815};; 3-oxoacyl-[acyl-carrier-protein] synthase III {ECO:0000256|HAMAP-Rule:MF
3-oxoacyl-[acyl-carrier-protein] synthase 3 n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SDV7_RHOMR
sw_4_scaffold_3012_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(10634..11533)
DNA (900bp) protein (300aa)
3-oxoacyl-[acyl-carrier-protein] synthase 3 {ECO:0000256|HAMAP-Rule:MF_01815}; EC=2.3.1.180 {ECO:0000256|HAMAP-Rule:MF_01815};; 3-oxoacyl-[acyl-carrier-protein] synthase III {ECO:0000256|HAMAP-Rule:MF
3-oxoacyl-ACP synthase n=1 Tax=Salisaeta longa RepID=UPI0003B475DB
fabH; 3-oxoacyl-ACP synthase
sw_4_scaffold_3012_13
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(11871..12668)
DNA (798bp) protein (266aa)
Phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019, ECO:0000256|SAAS:SAAS00054336}; EC=2.3.1.n2 {ECO:0000256|HAMAP-Rule:MF_00019, ECO:0000256|SAAS:SAAS00054327};; Acyl-ACP phosphotransacylase
Phosphate acyltransferase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SDV8_RHOMR
phosphate acyltransferase
sw_4_scaffold_3012_14
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


comp(12814..13011)
DNA (198bp) protein (66aa)
50S ribosomal protein L32 n=2 Tax=Salinibacter ruber RepID=RL32_SALRD
rpmF; 50S ribosomal protein L32
50S ribosomal protein L32 {ECO:0000255|HAMAP-Rule:MF_00340}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacte
sw_4_scaffold_3012_15
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(13073..13477)
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MH85_RHOM4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACY49674.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus mari
sw_4_scaffold_3012_16
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

15206..16099
DNA (894bp) protein (298aa)
chromosomal replication initiation protein n=1 Tax=Salisaeta longa RepID=UPI0003B3B2F6
chromosomal replication initiator protein DnaA
Chromosomal replication initiator protein DnaA {ECO:0000256|HAMAP-Rule:MF_00377, ECO:0000256|SAAS:SAAS00009621}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis;
sw_4_scaffold_3012_17
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

16386..17525
DNA (1140bp) protein (380aa)
DNA polymerase III subunit beta {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018259};; TaxID=761659 species="Bacter
dnaN; DNA polymerase III subunit beta; K02338 DNA polymerase III subunit beta [EC:2.7.7.7] id=24656813 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
dnaN; DNA polymerase III subunit beta
sw_4_scaffold_3012_18
unknown

Not on your lists

17653..17757
DNA (105bp) protein (35aa)

This feature has no annotations

Displaying 18 items

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