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sw_4_scaffold_319

Search features with annotation key words

Displaying 28 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_4_scaffold_319_1
unknown

Not on your lists

3..149
DNA (147bp) protein (49aa)

This feature has no annotations

sw_4_scaffold_319_2
unknown

Not on your lists

comp(209..430)
DNA (222bp) protein (74aa)

This feature has no annotations

sw_4_scaffold_319_3
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

1247..2143
DNA (897bp) protein (299aa)
Uncharacterized protein n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SKJ8_RHOMR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN73552.1}; Flags: Precursor;; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source
sw_4_scaffold_319_4
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

2255..2524
DNA (270bp) protein (90aa)
Prevent-host-death family protein n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MD71_RHOM4
prevent-host-death family protein
Prevent-host-death family protein {ECO:0000313|EMBL:ACY48983.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodoth
sw_4_scaffold_319_5
Echinicola vietnamensis, Echinicola, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

3432..3938
DNA (507bp) protein (169aa)
Tripartite ATP-independent periplasmic transporter solute receptor, DctP family n=1 Tax=Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221) RepID=L0G0W4_ECHVK
TRAP dicarboxylate family transporter subunit DctP
Tripartite ATP-independent periplasmic transporter solute receptor, DctP family {ECO:0000313|EMBL:AGA79844.1}; Flags: Precursor;; TaxID=926556 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagale
sw_4_scaffold_319_6
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

3969..4550
DNA (582bp) protein (194aa)
Tripartite ATP-independent periplasmic transporter DctQ component n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0ME14_RHOM4
tripartite AtP-independent periplasmic transporter subunit DctQ
Tripartite ATP-independent periplasmic transporter DctQ component {ECO:0000313|EMBL:ACY49158.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae;
sw_4_scaffold_319_7
Pontibacter korlensis, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

4653..5948
DNA (1296bp) protein (432aa)
membrane protein n=1 Tax=Flexithrix dorotheae RepID=UPI0003754C57
membrane protein
Membrane protein {ECO:0000313|EMBL:AKD03725.1}; TaxID=400092 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter korlensis.;"
sw_4_scaffold_319_8
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

6107..7651
DNA (1545bp) protein (515aa)
Altronate hydrolase n=1 Tax=Alishewanella aestuarii B11 RepID=J1Q1I4_9ALTE
D-galactarate dehydratase/Altronate hydrolase domain protein
D-galactarate dehydratase/Altronate hydrolase domain protein {ECO:0000313|EMBL:AHG87916.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
sw_4_scaffold_319_9
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

7871..9466
DNA (1596bp) protein (532aa)
Altronate oxidoreductase n=1 Tax=Tepidanaerobacter acetatoxydans (strain DSM 21804 / JCM 16047 / Re1) RepID=F4LWC5_TEPAE
Mannitol dehydrogenase domain-containing protein
Mannitol dehydrogenase domain-containing protein {ECO:0000313|EMBL:AHG87915.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
sw_4_scaffold_319_10
Flammeovirgaceae bacterium 311, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

9519..10967
DNA (1449bp) protein (483aa)
alpha,alpha-trehalase (EC:3.2.1.28)
Trehalase n=1 Tax=Alistipes indistinctus YIT 12060 RepID=G5H7W2_9BACT
Alpha,alpha-trehalase {ECO:0000313|EMBL:AHM60760.1}; TaxID=1257021 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; unclassified Flammeovirgaceae.;" source="Flammeovirgace
sw_4_scaffold_319_11
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

11015..11344
DNA (330bp) protein (110aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B78BD6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH23027.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_4_scaffold_319_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

11417..12412
DNA (996bp) protein (332aa)
LysM domain-containing protein
LysM domain-containing protein id=24656923 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
LysM domain protein {ECO:0000313|EMBL:ABC44315.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (s
sw_4_scaffold_319_13
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

12482..13225
DNA (744bp) protein (248aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H4S4_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH23029.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_4_scaffold_319_14
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

13341..14174
DNA (834bp) protein (278aa)
Protease HtpX homolog {ECO:0000256|HAMAP-Rule:MF_00188}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_00188};; Flags: Precursor;; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incer
Protease HtpX homolog n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MJP4_RHOM4
peptidase M48 Ste24p
sw_4_scaffold_319_15
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

14467..15792
DNA (1326bp) protein (442aa)
Dihydroorotase {ECO:0000256|HAMAP-Rule:MF_00220}; Short=DHOase {ECO:0000256|HAMAP-Rule:MF_00220};; EC=3.5.2.3 {ECO:0000256|HAMAP-Rule:MF_00220};; TaxID=518766 species="Bacteria; Bacteroidetes; Bactero
dihydroorotase n=1 Tax=Salisaeta longa RepID=UPI0003B4AD7E
dihydroorotase
sw_4_scaffold_319_16
GWA2_Deltaproteobacteria_54_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15898..16602)
DNA (705bp) protein (235aa)
metallophosphoesterase n=1 Tax=Salisaeta longa RepID=UPI0003B76A5C
metallophosphoesterase Tax=GWA2_Deltaproteobacteria_54_12_curated
metallophosphoesterase
sw_4_scaffold_319_17
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(16728..18215)
DNA (1488bp) protein (496aa)
Adenylosuccinate synthetase {ECO:0000255|HAMAP-Rule:MF_00011}; Short=AMPSase {ECO:0000255|HAMAP-Rule:MF_00011};; Short=AdSS {ECO:0000255|HAMAP-Rule:MF_00011};; EC=6.3.4.4 {ECO:0000255|HAMAP-Rule:MF_00
adenylosuccinate synthetase n=1 Tax=Salisaeta longa RepID=UPI0003B47F7C
purA; adenylosuccinate synthetase
sw_4_scaffold_319_18
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(18251..18625)
DNA (375bp) protein (125aa)
Anti-sigma factor antagonist n=2 Tax=Rhodothermus marinus RepID=D0MIN2_RHOM4
anti-anti-sigma factor
Anti-sigma factor antagonist {ECO:0000256|RuleBase:RU003749}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodotherm
sw_4_scaffold_319_19
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(18777..19754)
DNA (978bp) protein (326aa)
preprotein translocase subunit SecF n=1 Tax=Salisaeta longa RepID=UPI0003B3063A
protein-export membrane protein SecF
Protein translocase subunit SecF; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus marinus (strain ATCC 4381
sw_4_scaffold_319_20
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(20009..22069)
DNA (2061bp) protein (687aa)
secD; preprotein translocase subunit SecD
secD; preprotein translocase subunit SecD; K03072 preprotein translocase subunit SecD id=24659787 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Protein translocase subunit SecD {ECO:0000256|HAMAP-Rule:MF_01463}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Sali
sw_4_scaffold_319_21
unknown

Not on your lists

comp(22218..22841)
DNA (624bp) protein (208aa)

This feature has no annotations

sw_4_scaffold_319_22
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

23155..24000
DNA (846bp) protein (282aa)
Lysophospholipase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HAA6_SALRM
pldB; lysophospholipase
Lysophospholipase {ECO:0000313|EMBL:CBH24961.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (str
sw_4_scaffold_319_23
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

24011..24973
DNA (963bp) protein (321aa)
fructokinase (EC:2.7.1.4)
Fructokinase {ECO:0000313|EMBL:AEN72058.1}; EC=2.7.1.4 {ECO:0000313|EMBL:AEN72058.1};; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodother
Fructokinase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SE66_RHOMR
sw_4_scaffold_319_24
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(25108..26601)
DNA (1494bp) protein (498aa)
phosphatidic acid phosphatase n=1 Tax=Salisaeta longa RepID=UPI0003B414AD
phosphoesterase PA-phosphatase related protein
Phosphoesterase PA-phosphatase related protein {ECO:0000313|EMBL:AHG93776.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
sw_4_scaffold_319_25
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(26710..27555)
DNA (846bp) protein (282aa)
Purine nucleoside phosphorylase {ECO:0000256|PIRNR:PIRNR000477}; EC=2.4.2.1 {ECO:0000256|PIRNR:PIRNR000477, ECO:0000313|EMBL:CBH25276.1};; Inosine-guanosine phosphorylase {ECO:0000256|PIRNR:PIRNR00047
Purine nucleoside phosphorylase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HB71_SALRM
punA; Purine nucleoside phosphorylase 1
sw_4_scaffold_319_26
unknown

Not on your lists

comp(27641..27814)
DNA (174bp) protein (58aa)

This feature has no annotations

sw_4_scaffold_319_27
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(27811..28137)
DNA (327bp) protein (109aa)
cytochrome C n=1 Tax=Salisaeta longa RepID=UPI0003B4CD1E
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH25247.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_4_scaffold_319_28
Erysipelothrix rhusiopathiae, Erysipelothrix, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(28497..29027)
DNA (531bp) protein (177aa)
Protein RecA n=2 Tax=Erysipelothrix rhusiopathiae RepID=F5WSI8_ERYRF
recombinase A
Displaying 28 items

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