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sw_4_scaffold_329

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_4_scaffold_329_1
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

136..1668
DNA (1533bp) protein (511aa)
Potassium uptake protein, TrkH family n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SGQ1_RHOMR
TrkH family potassium uptake protein
Potassium uptake protein, TrkH family {ECO:0000313|EMBL:AEN74048.1}; Flags: Precursor;; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothe
sw_4_scaffold_329_2
Haliangium ochraceum, Haliangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1945..3126
DNA (1182bp) protein (394aa)
Ribonuclease BN n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LZF9_HALO1
ribonuclease BN
Ribonuclease BN {ECO:0000313|EMBL:ACY16421.1}; TaxID=502025 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Kofleriaceae; Haliangium.;" source="Haliangium ochrace
sw_4_scaffold_329_3
Nitrospina gracilis, Nitrospina, Nitrospinales, Nitrospinia, Nitrospinae, Bacteria

Not on your lists

3451..4017
DNA (567bp) protein (189aa)
Inorganic pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00209}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_00209};; Pyrophosphate phospho-hydrolase {ECO:0000256|HAMAP-Rule:MF_00209}; TaxID=1266370 species="Ba
inorganic diphosphatase (EC:3.6.1.1)
Inorganic pyrophosphatase n=1 Tax=Nitrospina gracilis 3/211 RepID=M1YVH0_9BACT
sw_4_scaffold_329_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(4244..4774)
DNA (531bp) protein (177aa)
hypothetical protein
hypothetical protein id=24658933 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH24131.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_4_scaffold_329_5
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(4935..5957)
DNA (1023bp) protein (341aa)
porphobilinogen synthase (EC:4.2.1.24)
Delta-aminolevulinic acid dehydratase {ECO:0000256|RuleBase:RU000515}; EC=4.2.1.24 {ECO:0000256|RuleBase:RU000515};; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sed
delta-aminolevulinic acid dehydratase n=1 Tax=Salisaeta longa RepID=UPI0003B4C9A3
sw_4_scaffold_329_6
Shewanella benthica, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6133..7338)
DNA (1206bp) protein (402aa)
Zinc-dependent metallopeptidase n=1 Tax=Shewanella benthica KT99 RepID=A9DH08_9GAMM
Zinc-dependent metallopeptidase {ECO:0000313|EMBL:EDP99252.1}; TaxID=314608 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" source="Shewanella be
zinc-dependent metallopeptidase
sw_4_scaffold_329_7
GWC2_Geobacteraceae_53_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7991..8767)
DNA (777bp) protein (259aa)
hypothetical protein n=1 Tax=Fervidibacteria bacterium SCGC AAA471-D06 RepID=UPI0003688EC3
DNA polymerase subunit beta Tax=GWC2_Geobacteraceae_53_11_curated
hypothetical protein
sw_4_scaffold_329_8
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(8939..9925)
DNA (987bp) protein (329aa)
Aspartate carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_00001}; EC=2.1.3.2 {ECO:0000256|HAMAP-Rule:MF_00001};; Aspartate transcarbamylase {ECO:0000256|HAMAP-Rule:MF_00001}; TaxID=518766 species="Bac
Aspartate carbamoyltransferase n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MG65_RHOM4
aspartate carbamoyltransferase
sw_4_scaffold_329_9
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(9985..10602)
DNA (618bp) protein (206aa)
uracil phosphoribosyltransferase (EC:2.4.2.9)
Bifunctional protein PyrR n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SEL9_RHOMR
Bifunctional protein PyrR {ECO:0000256|HAMAP-Rule:MF_01219}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermu
sw_4_scaffold_329_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

10853..11788
DNA (936bp) protein (312aa)
hypothetical protein
hypothetical protein id=24659285 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:ABC45035.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_4_scaffold_329_11
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

11899..13101
DNA (1203bp) protein (401aa)
Amidohydrolase {ECO:0000313|EMBL:ACY47446.1}; EC=3.5.1.32 {ECO:0000313|EMBL:ACY47446.1};; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodot
N-acyl-L-amino acid amidohydrolase n=1 Tax=Salisaeta longa RepID=UPI0003B3B94A
amidohydrolase
sw_4_scaffold_329_12
unknown

Not on your lists

13575..14171
DNA (597bp) protein (199aa)

This feature has no annotations

sw_4_scaffold_329_13
Chroococcidiopsis thermalis, Chroococcidiopsis, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

14325..14849
DNA (525bp) protein (175aa)
Uncharacterized protein {ECO:0000313|EMBL:AFY86389.1}; TaxID=251229 species="Bacteria; Cyanobacteria; Pleurocapsales; Chroococcidiopsis.;" source="Chroococcidiopsis thermalis PCC 7203.;"
sw_4_scaffold_329_14
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(15096..16250)
DNA (1155bp) protein (385aa)
Uncharacterized protein n=2 Tax=Salinibacter ruber RepID=D5H905_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC44049.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_4_scaffold_329_15
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(16399..16971)
DNA (573bp) protein (191aa)
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_014
methionine sulfoxide reductase A n=1 Tax=Salisaeta longa RepID=UPI0003B61186
msrA; peptide methionine sulfoxide reductase MsrA
sw_4_scaffold_329_16
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(17079..18200)
DNA (1122bp) protein (374aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B370EA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC45007.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_4_scaffold_329_17
Cyanothece sp. PCC 7425, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(18447..18692)
DNA (246bp) protein (82aa)
Methyltransferase type 11 n=1 Tax=Cyanothece sp. (strain PCC 7425 / ATCC 29141) RepID=B8HPE8_CYAP4
type 11 methyltransferase
Methyltransferase type 11 {ECO:0000313|EMBL:ACL47408.1}; TaxID=395961 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. (strain PCC 7425 / AT
sw_4_scaffold_329_18
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(18724..19065)
DNA (342bp) protein (114aa)
hypothetical protein
hypothetical protein id=24657653 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:ABC44322.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_4_scaffold_329_19
RBG_19FT_COMBO_Chloroflexi_55_16_curated, Chloroflexi, Bacteria

Not on your lists

19215..19433
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IBC4_METNO
hypothetical protein; K09165 hypothetical protein Tax=RBG_19FT_COMBO_Chloroflexi_55_16_curated
hypothetical protein
sw_4_scaffold_329_20
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(19442..20302)
DNA (861bp) protein (287aa)
Uncharacterized protein n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SE78_RHOMR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN72070.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus mari
sw_4_scaffold_329_21
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(20550..22310)
DNA (1761bp) protein (587aa)
Carboxy-terminal peptidase {ECO:0000313|EMBL:CBH23878.1}; EC=3.4.21.- {ECO:0000313|EMBL:CBH23878.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodotherma
Carboxy-terminal peptidase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H773_SALRM
prc; carboxy-terminal peptidase
sw_4_scaffold_329_22
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(22310..23209)
DNA (900bp) protein (300aa)
Sec-independent protein translocase protein TatC n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SE80_RHOMR
Sec-independent protein translocase subunit TatC
Sec-independent protein translocase protein TatC {ECO:0000256|HAMAP-Rule:MF_00902}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus
sw_4_scaffold_329_23
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(23266..23904)
DNA (639bp) protein (213aa)
Phosphoribosyltransferase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SE81_RHOMR
phosphoribosyltransferase
Phosphoribosyltransferase {ECO:0000313|EMBL:ACY47034.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus ma
sw_4_scaffold_329_24
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(24140..25375)
DNA (1236bp) protein (412aa)
Serine hydroxymethyltransferase n=3 Tax=Salinibacter ruber RepID=GLYA_SALRD
glyA; serine hydroxymethyltransferase
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051, ECO:0000313|EMBL:CBH23875.1}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};
sw_4_scaffold_329_25
unknown

Not on your lists

comp(25470..25847)
DNA (378bp) protein (126aa)

This feature has no annotations

sw_4_scaffold_329_26
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(25944..26828)
DNA (885bp) protein (295aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H768_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH23873.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_4_scaffold_329_27
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(26939..27433)
DNA (495bp) protein (165aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915, ECO:0000313|EMBL:CBH25355.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroide
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S0G8_SALRD
fklB; peptidyl-prolyl cis-trans isomerase
sw_4_scaffold_329_28
Pantoea sp. At-9b, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27911..28168
DNA (258bp) protein (86aa)
Uncharacterized protein {ECO:0000313|EMBL:ADU67886.1}; TaxID=592316 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea sp. (strai
Displaying 28 items

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