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sw_4_scaffold_367

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_4_scaffold_367_1
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..240)
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A0X2_STAND
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADH87482.1}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain
sw_4_scaffold_367_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(344..1096)
DNA (753bp) protein (251aa)
Chemotaxis MotB protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HCS5_SALRM
motB; chemotaxis MotB protein
Chemotaxis MotB protein {ECO:0000313|EMBL:CBH25830.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_4_scaffold_367_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

1284..2636
DNA (1353bp) protein (451aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H8A2_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24257.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_4_scaffold_367_4
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

2708..4396
DNA (1689bp) protein (563aa)
Ribulokinase {ECO:0000256|SAAS:SAAS00183333}; EC=2.7.1.16 {ECO:0000256|SAAS:SAAS00183333};; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Ribulokinase n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MES1_RHOM4
Carbohydrate kinase, FGGY
sw_4_scaffold_367_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(4583..5062)
DNA (480bp) protein (160aa)
hypothetical protein
hypothetical protein id=24658096 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH25297.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_4_scaffold_367_6
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(5372..7006)
DNA (1635bp) protein (545aa)
DNA helicase n=1 Tax=Salisaeta longa RepID=UPI0003B75CA3
replicative DNA helicase
Replicative DNA helicase {ECO:0000313|EMBL:ACY46924.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus mar
sw_4_scaffold_367_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(7153..7974)
DNA (822bp) protein (274aa)
DNA polymerase-related protein,bacteriophage-type {ECO:0000313|EMBL:CBH22947.1}; EC=2.7.7.7 {ECO:0000313|EMBL:CBH22947.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incer
DNA polymerase-related protein,bacteriophage-type n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H4J2_SALRM
dbh2; DNA polymerase-like protein
sw_4_scaffold_367_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(8002..9366)
DNA (1365bp) protein (455aa)
Coenzyme A biosynthesis bifunctional protein coaBC {ECO:0000313|EMBL:CBH22948.1}; EC=4.1.1.36 {ECO:0000313|EMBL:CBH22948.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Inc
phosphopantothenoylcysteine decarboxylase n=1 Tax=Salisaeta longa RepID=UPI0003B2EDF6
coaBC; Coenzyme A biosynthesis bifunctional protein coaBC
sw_4_scaffold_367_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(9460..9783)
DNA (324bp) protein (108aa)
hypothetical protein
hypothetical protein id=24656838 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH22949.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_4_scaffold_367_10
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(9870..10781)
DNA (912bp) protein (304aa)
guanylate kinase (EC:2.7.4.8)
Guanylate kinase {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00021750}; EC=2.7.4.8 {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00036702};; GMP kinase {ECO:0000256|HAMAP-Rule:MF_0
Guanylate kinase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SDX3_RHOMR
sw_4_scaffold_367_11
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(10797..11453)
DNA (657bp) protein (219aa)
ribonuclease H (EC:3.1.26.4)
Ribonuclease HII {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016879}; Short=RNase HII {ECO:0000256|HAMAP-Rule:MF_00052};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SA
Ribonuclease HII n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SIA9_RHOMR
sw_4_scaffold_367_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

12375..13487
DNA (1113bp) protein (371aa)
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884, ECO:0000313|EMBL:CBH25482.1}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:M
Transcription termination factor Rho n=2 Tax=Salinibacter ruber RepID=D5HBS7_SALRM
rho; transcription termination factor Rho
sw_4_scaffold_367_13
Rubrobacter radiotolerans, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13548..14408)
DNA (861bp) protein (287aa)
2,5-didehydrogluconate reductase n=2 Tax=Mycobacterium RepID=A1UCN2_MYCSK
Aldo/keto reductases related to diketogulonate reductase
Aldo/keto reductases related to diketogulonate reductase {ECO:0000313|EMBL:AHY48356.1}; TaxID=42256 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteracea
sw_4_scaffold_367_14
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(14583..15800)
DNA (1218bp) protein (406aa)
membrane protein n=1 Tax=Hymenobacter norwichensis RepID=UPI0003B57BB8
major facilitator superfamily protein
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ADB36609.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (stra
sw_4_scaffold_367_15
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15899..16195)
DNA (297bp) protein (99aa)
Glycoside hydrolase family 16 n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HF31_ANADF
glycoside hydrolase
Glycoside hydrolase family 16 {ECO:0000313|EMBL:ABS27327.1}; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacte
sw_4_scaffold_367_16
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

16283..17098
DNA (816bp) protein (272aa)
radC; DNA repair protein RadC
radC; DNA repair protein RadC; K03630 DNA repair protein RadC id=24658282 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
DNA repair protein RadC {ECO:0000313|EMBL:CBH25481.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_4_scaffold_367_17
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(17116..18627)
DNA (1512bp) protein (504aa)
Amidophosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; Short=ATase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; EC=2.4.2.14 {ECO:0000256
amidophosphoribosyltransferase n=1 Tax=Salisaeta longa RepID=UPI0003B5D0BD
purF; amidophosphoribosyltransferase
Displaying 17 items

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