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sw_4_scaffold_452

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_4_scaffold_452_1
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


3..1949
DNA (1947bp) protein (649aa)
Arginine--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000255|HAMAP-Rule:MF_00123};; Arginyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_00123}; Short=ArgRS {ECO:0000255|HAMAP-Rule:
arginyl-tRNA synthetase n=1 Tax=Salisaeta longa RepID=UPI0003B42E34
argS; arginyl-tRNA synthetase
sw_4_scaffold_452_2
RBG_13_Planctomycetes_63_9_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists


comp(2076..2429)
DNA (354bp) protein (118aa)
S23 ribosomal protein n=1 Tax=Thiorhodococcus drewsii AZ1 RepID=G2DVU6_9GAMM
30S ribosomal protein S23 Tax=RBG_13_Planctomycetes_63_9_curated
30S ribosomal protein S23
sw_4_scaffold_452_3
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

2633..3508
DNA (876bp) protein (292aa)
Cell division protein FtsX n=2 Tax=Rhodothermus marinus RepID=D0MFK6_RHOM4
hypothetical protein
Cell division protein FtsX {ECO:0000256|PIRNR:PIRNR003097}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus
sw_4_scaffold_452_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

3602..4684
DNA (1083bp) protein (361aa)
hypothetical protein
hypothetical protein id=24657881 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH25089.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_4_scaffold_452_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

4875..5735
DNA (861bp) protein (287aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H9X7_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24832.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_4_scaffold_452_6
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

5852..6619
DNA (768bp) protein (256aa)
Putative secreted Zn-dependent protease n=1 Tax=Synechococcus sp. (strain ATCC 27167 / PCC 6312) RepID=K9RV72_SYNP3
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
putative secreted Zn-dependent protease
sw_4_scaffold_452_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

6764..8107
DNA (1344bp) protein (448aa)
phosphohydrolase
phosphohydrolase; K06885 id=24659667 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Phosphohydrolase {ECO:0000313|EMBL:CBH24833.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (stra
sw_4_scaffold_452_8
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(8317..8550)
DNA (234bp) protein (78aa)
cold-shock protein n=1 Tax=Gracilimonas tropica RepID=UPI000374D986
cold-shock DNA-binding domain-containing protein
Cold-shock DNA-binding domain protein {ECO:0000313|EMBL:AEN72064.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rho
sw_4_scaffold_452_9
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(8711..9322)
DNA (612bp) protein (204aa)
hypoxanthine phosphoribosyltransferase (EC:2.4.2.8)
Hypoxanthine phosphoribosyltransferase {ECO:0000313|EMBL:AEN73813.1}; EC=2.4.2.8 {ECO:0000313|EMBL:AEN73813.1};; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis;
Hypoxanthine phosphoribosyltransferase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SJE1_RHOMR
sw_4_scaffold_452_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(9445..10779)
DNA (1335bp) protein (445aa)
tRNA(Ile)-lysidine synthase {ECO:0000256|HAMAP-Rule:MF_01161, ECO:0000256|SAAS:SAAS00043109}; EC=6.3.4.19 {ECO:0000256|HAMAP-Rule:MF_01161, ECO:0000256|SAAS:SAAS00043112};; tRNA(Ile)-2-lysyl-cytidine
tRNA(Ile)-lysidine synthase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H9Y4_SALRM
mesJ; cell cycle protein MesJ
sw_4_scaffold_452_11
Scytonema millei, Scytonema, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(10861..11829)
DNA (969bp) protein (323aa)
Uncharacterized protein n=1 Tax=Chroococcidiopsis thermalis PCC 7203 RepID=K9U352_9CYAN
Membrane protein {ECO:0000313|EMBL:KIF22717.1}; TaxID=1245923 species="Bacteria; Cyanobacteria; Nostocales; Scytonemataceae; Scytonema.;" source="Scytonema millei VB511283.;"
hypothetical protein
sw_4_scaffold_452_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(12035..14083)
DNA (2049bp) protein (683aa)
mutL; DNA mismatch repair protein mutL; K03572 DNA mismatch repair protein MutL id=24659673 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
mutL; DNA mismatch repair protein mutL
DNA mismatch repair protein MutL {ECO:0000256|HAMAP-Rule:MF_00149, ECO:0000256|SAAS:SAAS00058680}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermacea
sw_4_scaffold_452_13
unknown

Not on your lists

comp(14167..14382)
DNA (216bp) protein (72aa)

This feature has no annotations

sw_4_scaffold_452_14
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(14602..15477)
DNA (876bp) protein (292aa)
Phosphatidate cytidylyltransferase {ECO:0000256|RuleBase:RU003938}; EC=2.7.7.41 {ECO:0000256|RuleBase:RU003938};; Flags: Precursor;; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order
Phosphatidate cytidylyltransferase n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MH97_RHOM4
phosphatidate cytidylyltransferase
sw_4_scaffold_452_15
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(15527..16144)
DNA (618bp) protein (206aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H9Y7_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24842.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_4_scaffold_452_16
Synechococcus sp. PCC 7002, Synechococcus, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(16279..17781)
DNA (1503bp) protein (501aa)
Sodium-coupled permease n=1 Tax=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) RepID=B1XK96_SYNP2
sodium-coupled permease
Sodium-coupled permease {ECO:0000313|EMBL:ACA99142.1}; TaxID=32049 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Synechococcus.;" source="Synechococcus sp. (strain ATCC 27264
sw_4_scaffold_452_17
unknown

Not on your lists

18297..19508
DNA (1212bp) protein (404aa)

This feature has no annotations

sw_4_scaffold_452_18
unknown

Not on your lists

comp(19409..19669)
DNA (261bp) protein (87aa)

This feature has no annotations

sw_4_scaffold_452_19
Leptolyngbya sp. PCC 7375, Leptolyngbya, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(19673..20362)
DNA (690bp) protein (230aa)
Transposase n=1 Tax=Leptolyngbya sp. PCC 7375 RepID=K9F3L4_9CYAN
Transposase {ECO:0000313|EMBL:EKV03554.1}; TaxID=102129 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Leptolyngbya.;" source="Leptolyngbya sp. PCC 7375.;"
hypothetical protein
sw_4_scaffold_452_20
Salisaeta longa, Salisaeta, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(20538..21035)
DNA (498bp) protein (166aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B43724
sw_4_scaffold_452_21
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(21131..22159)
DNA (1029bp) protein (343aa)
Quinolinate synthase A {ECO:0000256|HAMAP-Rule:MF_00568}; EC=2.5.1.72 {ECO:0000256|HAMAP-Rule:MF_00568};; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodoth
quinolinate synthetase n=1 Tax=Salisaeta longa RepID=UPI0003B406CF
quinolinate synthetase complex subunit A
sw_4_scaffold_452_22
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

22546..23046
DNA (501bp) protein (167aa)
HNH endonuclease n=2 Tax=Salinibacter ruber RepID=D5H8E2_SALRM
HNH endonuclease domain-containing protein
HNH endonuclease domain protein {ECO:0000313|EMBL:ABC45001.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibac
sw_4_scaffold_452_23
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

23255..23794
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SK83_RHOMR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN73136.1}; Flags: Precursor;; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source
sw_4_scaffold_452_24
unknown

Not on your lists

comp(23928..24476)
DNA (549bp) protein (183aa)

This feature has no annotations

sw_4_scaffold_452_25
unknown

Not on your lists

comp(24484..24987)
DNA (504bp) protein (168aa)

This feature has no annotations

sw_4_scaffold_452_26
Rubrobacter radiotolerans, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25087..25662)
DNA (576bp) protein (192aa)
hypothetical protein n=1 Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B73CA7
Putative restriction endonuclease
Putative restriction endonuclease {ECO:0000313|EMBL:AHY47565.1}; TaxID=42256 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" sourc
sw_4_scaffold_452_27
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25701..26264)
DNA (564bp) protein (188aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B5EE34
Uncharacterized protein {ECO:0000313|EMBL:ETW99778.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
hypothetical protein
sw_4_scaffold_452_28
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(26341..26838)
DNA (498bp) protein (166aa)
glycosyl transferase n=1 Tax=Salisaeta longa RepID=UPI0003B3F296
glycosyl transferase-like protein
Glycosyl transferase-related protein {ECO:0000313|EMBL:ABC44067.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Sali
sw_4_scaffold_452_29
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(27046..27990)
DNA (945bp) protein (315aa)
Amidinotransferase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SGH6_RHOMR
amidinotransferase
Amidinotransferase {ECO:0000313|EMBL:AEN73672.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus marinus S
sw_4_scaffold_452_30
unknown

Not on your lists

comp(28040..29107)
DNA (1068bp) protein (356aa)

This feature has no annotations

Displaying items 1-30 of 35 in total

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