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sw_4_scaffold_481

Search features with annotation key words

Displaying 30 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_4_scaffold_481_1
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(2..2524)
DNA (2523bp) protein (841aa)
penicillin-binding protein (EC:2.4.1.129)
Penicillin-binding protein, 1A family {ECO:0000313|EMBL:ACY47180.1}; EC=2.4.1.129 {ECO:0000313|EMBL:ACY47180.1};; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis;
Penicillin-binding protein, 1A family n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MDI7_RHOM4
sw_4_scaffold_481_2
unknown

Not on your lists

2641..2790
DNA (150bp) protein (50aa)

This feature has no annotations

sw_4_scaffold_481_3
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(2807..3235)
DNA (429bp) protein (143aa)
BLUF domain protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PAY1_9BACT
bLUF domain protein
BLUF domain protein {ECO:0000313|EMBL:CBK40390.1}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
sw_4_scaffold_481_4
Desulfotalea psychrophila, Desulfotalea, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3885..5585
DNA (1701bp) protein (567aa)
Related to hexosyltransferase n=1 Tax=Desulfotalea psychrophila (strain LSv54 / DSM 12343) RepID=Q6ARI7_DESPS
hexosyltransferase
Related to hexosyltransferase {ECO:0000313|EMBL:CAG35038.1}; TaxID=177439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfotalea.;" source="Desulfota
sw_4_scaffold_481_5
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

5690..6298
DNA (609bp) protein (203aa)
Uncharacterized protein n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8K147_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG93499.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
sw_4_scaffold_481_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(6308..6604)
DNA (297bp) protein (99aa)
AsnC family transcriptional regulator n=1 Tax=Salisaeta longa RepID=UPI0003B39840
AsnC family transcriptional regulator
Transcriptional regulator, AsnC family {ECO:0000313|EMBL:CBH25393.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Sa
sw_4_scaffold_481_7
unknown

Not on your lists

comp(6924..7298)
DNA (375bp) protein (125aa)

This feature has no annotations

sw_4_scaffold_481_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(7357..9672)
DNA (2316bp) protein (772aa)
recJ; single-stranded-DNA-specific exonuclease RecJ; K07462 single-stranded-DNA-specific exonuclease [EC:3.1.-.-] id=24658177 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Single-stranded-DNA-specific exonuclease RecJ {ECO:0000313|EMBL:ABC45534.1}; EC=3.1.-.- {ECO:0000313|EMBL:ABC45534.1};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae
recJ; single-stranded-DNA-specific exonuclease RecJ
sw_4_scaffold_481_9
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(9674..11071)
DNA (1398bp) protein (466aa)
Nuclease SbcCD, D subunit n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SFN3_RHOMR
nuclease SbcCD subunit D
Nuclease SbcCD, D subunit {ECO:0000313|EMBL:AEN72203.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus ma
sw_4_scaffold_481_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(11149..11436)
DNA (288bp) protein (96aa)
penicillin-binding protein n=1 Tax=Salisaeta longa RepID=UPI0003B782C7
mcpA; methyl-accepting chemotaxis protein
Transglycosylase domain protein {ECO:0000313|EMBL:ABC43731.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibac
sw_4_scaffold_481_11
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(11430..13787)
DNA (2358bp) protein (786aa)
penicillin-binding protein (EC:2.4.1.129)
Penicillin-binding protein, 1A family {ECO:0000313|EMBL:ACY47180.1}; EC=2.4.1.129 {ECO:0000313|EMBL:ACY47180.1};; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis;
Penicillin-binding protein, 1A family n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MDI7_RHOM4
sw_4_scaffold_481_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(13869..14615)
DNA (747bp) protein (249aa)
serine/threonine protein phosphatase family protein; K03269 UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] id=24657553 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
serine/threonine protein phosphatase family protein
Ser/Thr protein phosphatase superfamily {ECO:0000313|EMBL:ABC44365.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="S
sw_4_scaffold_481_13
unknown

Not on your lists

comp(14716..14874)
DNA (159bp) protein (53aa)

This feature has no annotations

sw_4_scaffold_481_14
Halomicrobium katesii, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15169..15876)
DNA (708bp) protein (236aa)
hypothetical protein n=1 Tax=Halomicrobium katesii RepID=UPI000372EC0A
sw_4_scaffold_481_15
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

15878..16606
DNA (729bp) protein (243aa)
gdhA; glutamate dehydrogenase; K00261 glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] id=24658199 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
gdhA; glutamate dehydrogenase
Glutamate dehydrogenase, short peptide {ECO:0000313|EMBL:ABC44728.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Sa
sw_4_scaffold_481_16
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(16641..17729)
DNA (1089bp) protein (363aa)
LacI family transcriptional regulator n=1 Tax=Salisaeta longa RepID=UPI0003B7269D
LacI family transcriptional regulator
Transcriptional regulator, LacI family {ECO:0000313|EMBL:AEN73314.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rh
sw_4_scaffold_481_17
unknown

Not on your lists

comp(17808..18188)
DNA (381bp) protein (127aa)

This feature has no annotations

sw_4_scaffold_481_18
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(18342..19703)
DNA (1362bp) protein (454aa)
Oxidoreductase, FAD-binding n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H716_SALRM
oxidoreductase, FAD-binding
Oxidoreductase, FAD-binding {ECO:0000313|EMBL:CBH23821.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter
sw_4_scaffold_481_19
unknown

Not on your lists

comp(19739..20161)
DNA (423bp) protein (141aa)

This feature has no annotations

sw_4_scaffold_481_20
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

20408..20962
DNA (555bp) protein (185aa)
Uncharacterized protein n=2 Tax=Salinibacter ruber RepID=D5HBF6_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH25361.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_4_scaffold_481_21
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

21009..23003
DNA (1995bp) protein (665aa)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:000
threonyl-tRNA synthetase n=1 Tax=Salisaeta longa RepID=UPI0003B43538
thrS; threonyl-tRNA synthetase
sw_4_scaffold_481_22
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

23072..24127
DNA (1056bp) protein (352aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MI20_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA44060.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_4_scaffold_481_23
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

24332..24799
DNA (468bp) protein (156aa)
Translation initiation factor IF-3 n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HD35_SALRM
infC; translation initiation factor IF-3
Translation initiation factor IF-3 {ECO:0000256|HAMAP-Rule:MF_00080, ECO:0000256|RuleBase:RU000646}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermac
sw_4_scaffold_481_24
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


25033..25224
DNA (192bp) protein (64aa)
50S ribosomal protein L35 n=1 Tax=Salisaeta longa RepID=UPI0003B34C3C
hypothetical protein
50S ribosomal protein L35 {ECO:0000255|HAMAP-Rule:MF_00514}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacte
sw_4_scaffold_481_25
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


25334..25681
DNA (348bp) protein (116aa)
50S ribosomal protein L20 n=2 Tax=Salinibacter ruber RepID=RL20_SALRD
rplT; 50S ribosomal protein L20
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Sali
sw_4_scaffold_481_26
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


25911..26939
DNA (1029bp) protein (343aa)
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016813}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00089474};; Phenylalanyl-t
Phenylalanine--tRNA ligase alpha subunit n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HD39_SALRM
pheS; phenylalanyl-tRNA synthetase subunit alpha
sw_4_scaffold_481_27
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

27038..29566
DNA (2529bp) protein (843aa)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tR
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HD40_SALRM
pheT; phenylalanyl-tRNA synthetase subunit beta
sw_4_scaffold_481_28
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

29722..30030
DNA (309bp) protein (103aa)
dopamine receptor D4
dopamine receptor D4 id=24658756 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Dopamine receptor D4 {ECO:0000313|EMBL:ABC46345.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (
sw_4_scaffold_481_29
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

30171..30521
DNA (351bp) protein (117aa)
hypothetical protein
hypothetical protein; K09888 cell division protein ZapA id=24658757 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Cell division protein ZapA {ECO:0000256|SAAS:SAAS00072473}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter
sw_4_scaffold_481_30
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

30850..32451
DNA (1602bp) protein (534aa)
Cytochrome c-type biogenesis protein ccmF n=2 Tax=Salinibacter ruber RepID=D5HB80_SALRM
ccmF; cytochrome c-type biogenesis protein ccmF
Cytochrome c-type biogenesis protein ccmF {ECO:0000313|EMBL:CBH25285.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source=
Displaying 30 items

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