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sw_4_scaffold_637

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Displaying 21 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_4_scaffold_637_1
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(3..314)
DNA (312bp) protein (104aa)
NUDIX hydrolase n=1 Tax=Salisaeta longa RepID=UPI0003B31050
ADP-ribose pyrophosphatase {ECO:0000313|EMBL:CDM65900.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
NUDIX hydrolase
sw_4_scaffold_637_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(402..1637)
DNA (1236bp) protein (412aa)
Cupin superfamily protein n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S4H4_SALRD
cupin superfamily protein
Cupin superfamily protein {ECO:0000313|EMBL:ABC44118.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ru
sw_4_scaffold_637_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(1717..1905)
DNA (189bp) protein (63aa)
Uncharacterized protein n=2 Tax=Salinibacter ruber RepID=D5H766_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC43817.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_4_scaffold_637_4
unknown

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comp(2006..2227)
DNA (222bp) protein (74aa)

This feature has no annotations

sw_4_scaffold_637_5
unknown

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2374..2628
DNA (255bp) protein (85aa)

This feature has no annotations

sw_4_scaffold_637_6
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

2738..5785
DNA (3048bp) protein (1016aa)
excinuclease ABC subunit A n=1 Tax=Salisaeta longa RepID=UPI0003B68CB2
UvrABC system protein A {ECO:0000256|HAMAP-Rule:MF_00205, ECO:0000256|SAAS:SAAS00088996}; Short=UvrA protein {ECO:0000256|HAMAP-Rule:MF_00205};; Excinuclease ABC subunit A {ECO:0000256|HAMAP-Rule:MF_0
excinuclease ABC subunit A
sw_4_scaffold_637_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(5938..7926)
DNA (1989bp) protein (663aa)
ATP-dependent DNA helicase, RecQ family {ECO:0000313|EMBL:ABC43925.1}; EC=3.6.1.- {ECO:0000313|EMBL:ABC43925.1};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis;
helicase n=1 Tax=Salisaeta longa RepID=UPI0003B503D4
ATP-dependent DNA helicase RecQ
sw_4_scaffold_637_8
unknown

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8163..8876
DNA (714bp) protein (238aa)

This feature has no annotations

sw_4_scaffold_637_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(9348..10418)
DNA (1071bp) protein (357aa)
Integral membrane protein DUF6 n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S1Y7_SALRD
hypothetical protein
Integral membrane protein DUF6 {ECO:0000313|EMBL:ABC45741.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibact
sw_4_scaffold_637_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(11082..12092)
DNA (1011bp) protein (337aa)
(NAD+) isocitrate dehydrogenase; K00030 isocitrate dehydrogenase (NAD+) [EC:1.1.1.41] id=24659636 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
(NAD+) isocitrate dehydrogenase
Putative (NAD+) isocitrate dehydrogenase {ECO:0000313|EMBL:ABC44228.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="
sw_4_scaffold_637_11
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(12238..12708)
DNA (471bp) protein (157aa)
biopolymer transporter ExbD n=1 Tax=Salisaeta longa RepID=UPI0003B44A76
Biopolymer transport protein ExbD/TolR
Biopolymer transport protein ExbD/TolR {ECO:0000313|EMBL:ACY48603.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rh
sw_4_scaffold_637_12
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(12826..13419)
DNA (594bp) protein (198aa)
Biopolymer transport protein ExbD/TolR n=2 Tax=Rhodothermus marinus RepID=D0MJE6_RHOM4
biopolymer transport protein ExbD/TolR
Biopolymer transport protein ExbD/TolR {ECO:0000313|EMBL:ACY48604.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rh
sw_4_scaffold_637_13
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(13542..13814)
DNA (273bp) protein (91aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B79082
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24805.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_4_scaffold_637_14
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(13913..14860)
DNA (948bp) protein (316aa)
MotA/TolQ/ExbB proton channel n=2 Tax=Rhodothermus marinus RepID=D0MJE7_RHOM4
MotA/TolQ/ExbB proton channel
MotA/TolQ/ExbB proton channel {ECO:0000313|EMBL:AEN72993.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermu
sw_4_scaffold_637_15
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(15337..17103)
DNA (1767bp) protein (589aa)
Carboxyl-terminal protease {ECO:0000313|EMBL:ACY48606.1}; EC=3.4.21.102 {ECO:0000313|EMBL:ACY48606.1};; Flags: Precursor;; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incert
Carboxyl-terminal protease n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MJE8_RHOM4
carboxyl-terminal protease
sw_4_scaffold_637_16
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

17817..18797
DNA (981bp) protein (327aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B63AC0
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH25012.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_4_scaffold_637_17
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

18874..19944
DNA (1071bp) protein (357aa)
Uncharacterized ACR n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H833_SALRM
hypothetical protein
Uncharacterized ACR {ECO:0000313|EMBL:CBH24188.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (s
sw_4_scaffold_637_18
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(20032..20412)
DNA (381bp) protein (127aa)
Putative Holliday junction resolvase {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086483}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086510};; TaxID=762570 specie
Holliday junction resolvase n=1 Tax=Salisaeta longa RepID=UPI0003B70F6C
Holliday junction resolvase YqgF
sw_4_scaffold_637_19
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(20754..21278)
DNA (525bp) protein (175aa)
Histone family protein DNA-binding protein n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MGY4_RHOM4
histone family protein DNA-binding protein
Histone family protein DNA-binding protein {ECO:0000313|EMBL:ACY47769.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source
sw_4_scaffold_637_20
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(21511..22965)
DNA (1455bp) protein (485aa)
Guanosine-3',5'-bis(Diphosphate) 3'-pyrophosphohydrolase {ECO:0000313|EMBL:CBH24184.1}; EC=3.1.7.2 {ECO:0000313|EMBL:CBH24184.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II
MFS transporter n=1 Tax=Salisaeta longa RepID=UPI0003B5D90F
spoT; guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
sw_4_scaffold_637_21
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

23078..23791
DNA (714bp) protein (238aa)
Uncharacterized protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Displaying 21 items

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