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sw_4_scaffold_798

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Displaying 22 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_4_scaffold_798_1
unknown

Not on your lists

2..118
DNA (117bp) protein (39aa)

This feature has no annotations

sw_4_scaffold_798_2
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

350..853
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MDC4_RHOM4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACY49038.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus mari
sw_4_scaffold_798_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(879..1952)
DNA (1074bp) protein (358aa)
hypothetical protein
hypothetical protein id=24657928 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:ABC45989.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_4_scaffold_798_4
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2113..3243)
DNA (1131bp) protein (377aa)
Uncharacterized protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GDF6_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EYF06776.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondrom
hypothetical protein
sw_4_scaffold_798_5
RIFOXYB12_FULL_Lentisphaerae_65_16_curated, Lentisphaerae, Bacteria

Not on your lists

comp(3464..4633)
DNA (1170bp) protein (390aa)
indolepyruvate oxidoreductase subunit IorA (EC:1.2.7.8); K00179 indolepyruvate ferredoxin oxidoreductase, alpha subunit [EC:1.2.7.8] Tax=RIFOXYB12_FULL_Lentisphaerae_65_16_curated
Indolepyruvate ferredoxin oxidoreductase, alpha subunit n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5ZER2_9PORP
indolepyruvate oxidoreductase subunit IorA
sw_4_scaffold_798_6
unknown

Not on your lists

comp(4753..4962)
DNA (210bp) protein (70aa)

This feature has no annotations

sw_4_scaffold_798_7
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(5093..5680)
DNA (588bp) protein (196aa)
Aldehyde Dehydrogenase n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MI85_RHOM4
aldehyde dehydrogenase
Aldehyde Dehydrogenase {ECO:0000313|EMBL:ACY48193.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus marin
sw_4_scaffold_798_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(5707..6528)
DNA (822bp) protein (274aa)
aldehyde dehydrogenase n=1 Tax=Salisaeta longa RepID=UPI0003B5417D
aldHT; Aldehyde dehydrogenase
Aldehyde dehydrogenase {ECO:0000313|EMBL:CBH24915.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber
sw_4_scaffold_798_9
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

6901..8103
DNA (1203bp) protein (401aa)
aminotransferase A n=1 Tax=Salisaeta longa RepID=UPI0003B5A71C
class I and II aminotransferase
Aminotransferase class I and II {ECO:0000313|EMBL:ACY48194.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodother
sw_4_scaffold_798_10
Rhodonellum psychrophilum, Rhodonellum, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

8221..11334
DNA (3114bp) protein (1038aa)
TonB-denpendent receptor n=1 Tax=Rhodonellum psychrophilum GCM71 = DSM 17998 RepID=U5BXF8_9BACT
TonB-denpendent receptor {ECO:0000313|EMBL:ERM80597.1}; TaxID=1123057 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Rhodonellum.;" source="Rhodonellum psychrophilum GCM71
SusC/RagA family TonB-linked outer membrane protein
sw_4_scaffold_798_11
Fulvivirga imtechensis, Fulvivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

11404..12840
DNA (1437bp) protein (479aa)
Uncharacterized protein n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8JMX3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:ELR68859.1}; TaxID=1237149 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Fulvivirga.;" source="Fulvivirga imtechensis AK7.;"
hypothetical protein
sw_4_scaffold_798_12
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12833..13756
DNA (924bp) protein (308aa)
Beta-lactamase n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=E3FNK7_STIAD
beta-lactamase
Beta-lactamase {ECO:0000313|EMBL:ADO68086.1}; TaxID=378806 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Stigmatella.;" source="Stigmatella
sw_4_scaffold_798_13
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

13793..14971
DNA (1179bp) protein (393aa)
Conserved oxidoreductase n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S1R9_SALRD
oxidoreductase
Conserved oxidoreductase {ECO:0000313|EMBL:ABC45131.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rub
sw_4_scaffold_798_14
CG_Kuenen_03, Kuenenbacteria, Parcubacteria, Bacteria

Not on your lists

14923..16089
DNA (1167bp) protein (389aa)
diaminopimelate decarboxylase (EC:4.1.1.20); K01586 diaminopimelate decarboxylase [EC:4.1.1.20] Tax=CG_Kuenen_03
lysA; diaminopimelate decarboxylase (EC:4.1.1.20)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-J21 RepID=UPI00037399AA
sw_4_scaffold_798_15
Salisaeta longa, Salisaeta, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

16170..16520
DNA (351bp) protein (117aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B4A2C3
sw_4_scaffold_798_16
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

16845..17720
DNA (876bp) protein (292aa)
Peptide chain release factor RF-2 n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HA58_SALRM
prfB; peptide chain release factor RF-2
Peptide chain release factor 2 {ECO:0000256|SAAS:SAAS00090452}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Saliniba
sw_4_scaffold_798_17
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17880..18278
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0D5D1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ30033.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum J
hypothetical protein
sw_4_scaffold_798_18
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

18316..19374
DNA (1059bp) protein (353aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B78113
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC45170.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_4_scaffold_798_19
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

19423..20916
DNA (1494bp) protein (498aa)
L-aspartate oxidase {ECO:0000256|RuleBase:RU362049}; EC=1.4.3.16 {ECO:0000256|RuleBase:RU362049};; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermacea
L-aspartate oxidase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SG75_RHOMR
nadB; L-aspartate oxidase
sw_4_scaffold_798_20
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

21225..21665
DNA (441bp) protein (147aa)
hypothetical protein n=1 Tax=Salinibacter ruber RepID=UPI000066E350
hypothetical protein
Ribosome maturation factor RimP {ECO:0000255|HAMAP-Rule:MF_01077}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salin
sw_4_scaffold_798_21
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

21756..22178
DNA (423bp) protein (141aa)
transcription elongation factor NusA n=1 Tax=Salisaeta longa RepID=UPI0003B4E848
NusA antitermination factor
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodot
sw_4_scaffold_798_22
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

22175..23041
DNA (867bp) protein (289aa)
nusA; transcription factor
nusA; transcription elongation factor NusA; K02600 N utilization substance protein A id=24659739 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salini
Displaying 22 items

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