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sw_4_scaffold_109_4

Organism: SW_4_Bacteroidetes_Order_II__Incertae_sedis_67_19

near complete RP 46 / 55 MC: 1 BSCG 47 / 51 ASCG 12 / 38 MC: 1
Location: comp(7026..8654)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-54 factor n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S3F8_SALRD similarity UNIREF
DB: UNIREF100
  • Identity: 63.5
  • Coverage: 545.0
  • Bit_score: 656
  • Evalue 1.80e-185
rpoN; RNA polymerase sigma-54 factor similarity KEGG
DB: KEGG
  • Identity: 64.0
  • Coverage: 545.0
  • Bit_score: 661
  • Evalue 1.60e-187
RNA polymerase sigma-54 factor {ECO:0000313|EMBL:ABC45404.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibact similarity UNIPROT
DB: UniProtKB
  • Identity: 63.5
  • Coverage: 545.0
  • Bit_score: 656
  • Evalue 2.50e-185

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Taxonomy

Salinibacter ruber → Salinibacter → Bacteroidetes Order II. Incertae sedis → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1629
ATGCTCAACCTCAAACAAGAGCAAAAGCTTCAGCAGAAGCTCAGCCCGCAGCAGATCCAGTACATCAAGCTGCTGCAACTCAACACCCTGGACCTCGAGCAGCGCATCAAGGACGAGATGGAGTCCAATCCGCTGCTGGAGGAGGGCCTCAGCGAGGAGGAACGCGCGGAAGAGGAAAGCCTGAGCGACACCGAAGAAGACCTCGACGATGAAGAGCGCCTCGAAGACGAGCGCGAACGCGAGCTTGACGCCGAAGCCGAGAGCGAAGTCGAGATCGACGACGAGGACGAGTTCGACTGGGATGACCTCTTGAACGCCAGCGACGACCTGCACGGCTACAAGGCCAACGTCGAGGGCGGCGGCAGCTCGGAAGACGACGAGCGCGAGCGGCCGATGCGTGCGGAATCCACCATCGCCGAAGACCTGCGCGACCAGCTCACCTTTTCGGGGCTCAGCGAAGAAGACGAGCTAATCGCCGACCAGATCATCGGCTCCATCGACAAGGACGGCTACCTGCGCCGCCCGCTCGAGTCCATCGTCGACGACGTGCTCTTCAACGAGGGCATCGAGCTGGAGGAGAGCGACGTCGAGGCCGTGCTGAAGGAGATCCAGCAGCTCGACCCCACCGGCATTGCCGCGCGCGACTTGCGGGAGTGCCTGCTGTTGCAACTGGAGCAGCTGCCCGACGACACCACCGGGCGCGCGGTCGCCGCCGAGATGCTGCGCGAGCACTACGAGGCGTTCACGATGAAGCACTTCGGCAAGCTCAAAAAGCGTCTCGACGTCGACGACACCGAGCTCAAAGCGGCGTTCGACCTCATCAAAGAGCGCCTCGACCCCAAGCCCGGCGAAGGCTCCTTTAGCGCGCAGGAAAACTACATCACGCCCGACTTCACGGTGCGCTACGTGGACGGGGAGTTCGTCATTTTGCTCAACGGGCGCAACGCGCCGAAGCTGCACATTTCCAAGCAGTACCGCAAGATGCTCGAAGAGCTTTCGGCGGAGCAGAAAAAGCAAAAGCAGGCCGCCGGGCAGCAAAACGGCGAATCTTCAGCCGGCGGTGCGGACGACCAGCAGAAGCCCGGCCGGCCTCCCGGCGGAGACGACGGCGTCGACGAGGAGACGCGCGACTTCCTCAAGGACAAGTTCGATTCGGCGCGCTGGTTTATCAATTCCATCAACCAGCGCCGCCACACCATGACGATGGTCATGGACGCCATCGTGCAGGAGCAGGAAGACTTTTTTCGCCACGGGCCGGGCCACCTCAAACCGATGATTCTCAAAGACATCGCCGAGATCATCGAGATGGACATCTCCACGGTCAGCCGGGTGGTCAACGGCAAGTACGTGCAGACCGAGTGGGGCGTCTACGAGTTGAAGTACTTTTTCAGCGAAGGGTTGGAGACGGAAAGCGGCGAAGAGGTTTCCAATAAAGAAGTCAAAGCCATCCTCCAGCAGGTCGTCGACGAGGAAGACAAGACCAACCCGCTCAGTGACTCGAAGCTGGCCGACGCGCTGTCGGAGCGCGGTTTCAAGATTGCGCGGCGCACCGTCTCGAAGTACCGCAAGCAGCTTTCGATTCCCGTCGCGCGGCTGCGCAAGCAGATCGTGGTGGAAGAGGAGGAGTGA
PROTEIN sequence
Length: 543
MLNLKQEQKLQQKLSPQQIQYIKLLQLNTLDLEQRIKDEMESNPLLEEGLSEEERAEEESLSDTEEDLDDEERLEDERERELDAEAESEVEIDDEDEFDWDDLLNASDDLHGYKANVEGGGSSEDDERERPMRAESTIAEDLRDQLTFSGLSEEDELIADQIIGSIDKDGYLRRPLESIVDDVLFNEGIELEESDVEAVLKEIQQLDPTGIAARDLRECLLLQLEQLPDDTTGRAVAAEMLREHYEAFTMKHFGKLKKRLDVDDTELKAAFDLIKERLDPKPGEGSFSAQENYITPDFTVRYVDGEFVILLNGRNAPKLHISKQYRKMLEELSAEQKKQKQAAGQQNGESSAGGADDQQKPGRPPGGDDGVDEETRDFLKDKFDSARWFINSINQRRHTMTMVMDAIVQEQEDFFRHGPGHLKPMILKDIAEIIEMDISTVSRVVNGKYVQTEWGVYELKYFFSEGLETESGEEVSNKEVKAILQQVVDEEDKTNPLSDSKLADALSERGFKIARRTVSKYRKQLSIPVARLRKQIVVEEEE*