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sw_4_scaffold_109

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_4_scaffold_109_1

Not on your lists

comp(2..2035)
DNA (2034bp) protein (678aa)
Uncharacterized protein n=1 Tax=uncultured organism RepID=M1QC05_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:AGF93513.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
hypothetical protein
sw_4_scaffold_109_2

Not on your lists

comp(2129..5407)
DNA (3279bp) protein (1093aa)
Outer membrane protein with a TonB box n=1 Tax=uncultured organism RepID=M1PWK0_9ZZZZ
Outer membrane protein with a TonB box {ECO:0000313|EMBL:AGF93514.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
hypothetical protein
sw_4_scaffold_109_3

Not on your lists

comp(5613..6884)
DNA (1272bp) protein (424aa)
Peptidase M19, renal dipeptidase {ECO:0000313|EMBL:AGF93516.1}; EC=3.4.13.19 {ECO:0000313|EMBL:AGF93516.1};; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured o
membrane dipeptidase (EC:3.4.13.19)
Peptidase M19, renal dipeptidase n=1 Tax=uncultured organism RepID=M1P2A5_9ZZZZ
sw_4_scaffold_109_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(7026..8654)
DNA (1629bp) protein (543aa)
RNA polymerase sigma-54 factor n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S3F8_SALRD
rpoN; RNA polymerase sigma-54 factor
RNA polymerase sigma-54 factor {ECO:0000313|EMBL:ABC45404.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibact
sw_4_scaffold_109_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

8918..11335
DNA (2418bp) protein (806aa)
Holliday junction DNA helicase RuvB {ECO:0000313|EMBL:CBH24247.1}; EC=3.6.1.- {ECO:0000313|EMBL:CBH24247.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rho
Holliday junction DNA helicase RuvB n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H892_SALRM
ruvB; Holliday junction DNA helicase RuvB
sw_4_scaffold_109_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(11378..12145)
DNA (768bp) protein (256aa)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU000549};; Endopep
ATP-dependent Clp protease ClpP n=1 Tax=Salisaeta longa RepID=UPI0003B4303A
clpP; ATP-dependent Clp protease proteolytic subunit
sw_4_scaffold_109_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(12290..13717)
DNA (1428bp) protein (476aa)
Trigger factor {ECO:0000256|HAMAP-Rule:MF_00303, ECO:0000313|EMBL:CBH25811.1}; Short=TF {ECO:0000256|HAMAP-Rule:MF_00303};; EC=5.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00303};; PPIase {ECO:0000256|HAMAP-Rul
Trigger factor n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HCQ6_SALRM
tig; trigger factor Tig
sw_4_scaffold_109_8
unknown

Not on your lists

comp(13798..14196)
DNA (399bp) protein (133aa)

This feature has no annotations

sw_4_scaffold_109_9
unknown

Not on your lists

comp(14477..16348)
DNA (1872bp) protein (624aa)

This feature has no annotations

sw_4_scaffold_109_10
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(16581..16865)
DNA (285bp) protein (95aa)
Uncharacterized protein n=2 Tax=Rhodothermus marinus RepID=D0MEQ2_RHOM4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACY49280.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus mari
sw_4_scaffold_109_11
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

17096..17362
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MEQ1_RHOM4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACY49279.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus mari
sw_4_scaffold_109_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(17410..17952)
DNA (543bp) protein (181aa)
Crossover junction endodeoxyribonuclease RuvC {ECO:0000255|HAMAP-Rule:MF_00034}; EC=3.1.22.4 {ECO:0000255|HAMAP-Rule:MF_00034};; Holliday junction nuclease RuvC {ECO:0000255|HAMAP-Rule:MF_00034}; Holl
Crossover junction endodeoxyribonuclease RuvC n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=RUVC_SALRD
ruvC; Holliday junction resolvase
sw_4_scaffold_109_13
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(18045..18776)
DNA (732bp) protein (244aa)
transcriptional regulator n=1 Tax=Salisaeta longa RepID=UPI0003B3DFB6
hypothetical protein
Probable transcriptional regulatory protein Rmar_2399 {ECO:0000256|HAMAP-Rule:MF_00693}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodoth
sw_4_scaffold_109_14
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(18955..20100)
DNA (1146bp) protein (382aa)
Monooxygenase FAD-binding n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9AY13_HERA2
monooxygenase FAD-binding protein
Monooxygenase FAD-binding protein {ECO:0000313|EMBL:AHG90286.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
sw_4_scaffold_109_15
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(20258..21382)
DNA (1125bp) protein (375aa)
Anhydro-N-acetylmuramic acid kinase {ECO:0000256|HAMAP-Rule:MF_01270, ECO:0000256|SAAS:SAAS00085893}; EC=2.7.1.170 {ECO:0000256|HAMAP-Rule:MF_01270, ECO:0000256|SAAS:SAAS00085888};; AnhMurNAc kinase {
Anhydro-N-acetylmuramic acid kinase n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MD27_RHOM4
hypothetical protein
sw_4_scaffold_109_16
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(21481..22227)
DNA (747bp) protein (249aa)
hypothetical protein id=24658369 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN72741.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus mari
sw_4_scaffold_109_17
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(22456..23979)
DNA (1524bp) protein (508aa)
glucosyltransferase
glucosyltransferase id=24658368 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Putative glucosyltransferase {ECO:0000313|EMBL:ABC44582.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter
sw_4_scaffold_109_18

Not on your lists

comp(24251..26302)
DNA (2052bp) protein (684aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B7B4F7
FG-GAP repeat-containing protein {ECO:0000313|EMBL:AHN97875.1}; TaxID=1447237 species="Bacteria; environmental samples.;" source="uncultured bacterium lac127.;"
FG-GAP repeat-containing protein
sw_4_scaffold_109_19
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(26366..27775)
DNA (1410bp) protein (470aa)
Surface antigen, putative n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S3E8_SALRD
surface antigen
Surface antigen, putative {ECO:0000313|EMBL:ABC44983.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ru
sw_4_scaffold_109_20
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(28021..30480)
DNA (2460bp) protein (820aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S3E9_SALRD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC44547.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_4_scaffold_109_21
RBG_19FT_COMBO_Chloroflexi_55_16_curated, Chloroflexi, Bacteria

Not on your lists

comp(30633..30965)
DNA (333bp) protein (111aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B539BD
hypothetical protein Tax=RBG_19FT_COMBO_Chloroflexi_55_16_curated
hypothetical protein
sw_4_scaffold_109_22
RBG_16_Aminicenantes_63_16_curated, Aminicenantes, Bacteria

Not on your lists

comp(31065..32468)
DNA (1404bp) protein (468aa)
pepP; Xaa-Pro aminopeptidase; K01262 Xaa-Pro aminopeptidase [EC:3.4.11.9] Tax=RBG_16_Aminicenantes_63_16_curated
Xaa-Pro aminopeptidase n=1 Tax=Salisaeta longa RepID=UPI0003B6F18A
pepP; Xaa-Pro aminopeptidase
sw_4_scaffold_109_23
R_Betaproteobacteria_64_12, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32665..33456
DNA (792bp) protein (264aa)
hypothetical protein n=1 Tax=Fervidibacteria bacterium SCGC AAA471-D06 RepID=UPI0003688EC3
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_64_12_curated
HEPN domain-containing protein
sw_4_scaffold_109_24
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

33540..35465
DNA (1926bp) protein (642aa)
ATP-dependent DNA helicase RecG {ECO:0000313|EMBL:CBH23265.1}; EC=3.6.1.- {ECO:0000313|EMBL:CBH23265.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodoth
ATP-dependent DNA helicase RecG n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H5G0_SALRM
recG; ATP-dependent DNA helicase RecG
sw_4_scaffold_109_25
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

35575..35898
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Anabaena cylindrica (strain ATCC 27899 / PCC 7122) RepID=K9ZLZ4_ANACC
Uncharacterized protein {ECO:0000313|EMBL:CDM65391.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
protein of unknown function DUF433
sw_4_scaffold_109_26
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35898..36245
DNA (348bp) protein (116aa)
hypothetical protein n=1 Tax=Oscillatoria sp. PCC 10802 RepID=UPI0003653251
Uncharacterized protein {ECO:0000313|EMBL:ETX01588.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
hypothetical protein
sw_4_scaffold_109_27
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(36304..37575)
DNA (1272bp) protein (424aa)
3-oxoacyl-[acyl-carrier-protein] synthase 2 {ECO:0000256|PIRNR:PIRNR000447}; EC=2.3.1.179 {ECO:0000256|PIRNR:PIRNR000447};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incer
3-oxoacyl-[acyl-carrier-protein] synthase 2 n=2 Tax=Salinibacter ruber RepID=D5HCY0_SALRM
fabF; 3-oxoacyl-ACP synthase
sw_4_scaffold_109_28
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(37688..37933)
DNA (246bp) protein (82aa)
acpP; acyl carrier protein
acpP; acyl carrier protein; K02078 acyl carrier protein id=24658701 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Acyl carrier protein {ECO:0000256|HAMAP-Rule:MF_01217, ECO:0000256|RuleBase:RU003545}; Short=ACP {ECO:0000256|HAMAP-Rule:MF_01217};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order
sw_4_scaffold_109_29
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

38392..39552
DNA (1161bp) protein (387aa)
S-adenosylmethionine synthase (EC:2.5.1.6)
S-adenosylmethionine synthase {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541}; Short=AdoMet synthase {ECO:0000256|HAMAP-Rule:MF_00086};; EC=2.5.1.6 {ECO:0000256|HAMAP-Rule:MF_00086, E
S-adenosylmethionine synthase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SL72_RHOMR
sw_4_scaffold_109_30
Alcanivorax dieselolei, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

39754..40038
DNA (285bp) protein (95aa)
Putative transglycosylase associated protein YeaQ n=1 Tax=Alcanivorax dieselolei (strain DSM 16502 / CGMCC 1.3690 / B-5) RepID=K0CAR0_ALCDB
transglycosylase
Putative transglycosylase associated protein YeaQ {ECO:0000313|EMBL:AFT69703.1}; TaxID=930169 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;
Displaying items 1-30 of 31 in total

View Taxonomy