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sw_4_scaffold_215_10

Organism: SW_4_Bacteroidetes_Order_II__Incertae_sedis_67_19

near complete RP 46 / 55 MC: 1 BSCG 47 / 51 ASCG 12 / 38 MC: 1
Location: comp(11756..12745)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059, ECO:0000313|EMBL: similarity UNIPROT
DB: UniProtKB
  • Identity: 74.3
  • Coverage: 327.0
  • Bit_score: 495
  • Evalue 7.60e-137
DNA-directed RNA polymerase subunit alpha n=3 Tax=Salinibacter ruber RepID=RPOA_SALRD similarity UNIREF
DB: UNIREF100
  • Identity: 74.3
  • Coverage: 327.0
  • Bit_score: 495
  • Evalue 5.40e-137
rpoA; DNA-directed RNA polymerase subunit alpha similarity KEGG
DB: KEGG
  • Identity: 74.3
  • Coverage: 327.0
  • Bit_score: 495
  • Evalue 1.50e-137

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Taxonomy

Salinibacter ruber → Salinibacter → Bacteroidetes Order II. Incertae sedis → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 990
ATGAACACCAATCATGGACTGCAAATGCCGGAAGGCGTGCAGGTGGAAGACGCCTCCGAGACCTTTGGGCGTTTCGAGATCGAGCCGCTCGAACGCGGCTACGGCGTCACCATCGGCAACGCGCTGCGGCGCGTGCTGCTCTCCTCGCTTCGGGGCGTGGCCATTACCGCGCTCAAGATCGACGGCGTGCAGCACGAGTTCTCGACCGTGCCGGGCGTGACCGAGGACGTCTCCGACATCATCCTCAACCTCAAGGGCGTGCGCTTCCACACCGAGGAGCTCGACGACACGAGCGTCCACCTCGACCTGGAGGGGCCGGGCACTTGGACGGCCGCCGACATCGCCGAGGCGACCGCCGACTACGAAGTGCTCAACCCCGAGCATCACGTCGCCACCCTCGCCGAGGACGCCGACCTGAGCATCGACCTGCGCCTGGGGCGCGGGCGCGGCTACGTCGACGCCGAAGAAAACGAGCACGACGACGACCCCATCGGCGTCATCGCCATCGACTCGATCTTCACGCCCATCCTGAGCGTCAATTACAACGTGACGCCCACGCGCGTGGGGCAGAAGATCGCCTACGAGAAGCTCGAGGTCGAGATCGAAACCGACGGCTCGATCAGCGCCGAGGACGCGCTGACGCAGGCGGCGGCCATCCTGCGCGACCACATCGGCCTCTTCGTCGAGCTCGAAGGCGAGCCGGAGCCGGAGCCGGAGGAAGAAGAAGTCGACGCCGAGGTGCAGCGCATCCGCGAACTGCTGGCGCAGCCGGTCGACGAGCTGGACCTCTCGGTGCGCTCGCACAACTGCCTCAAGGCGGCCTCGATCAAAAACATCGGCGACCTGGTGCGGCGCGAGGAAAACGAAATGCTCAAGTTCCGCAACTTCGGCAAGAAGTCGCTTCAGGAGCTGATCGAAGTGCTCGACGACCGCGGCCTCCAGTTCGGCATGGACGTCGAGAAGTACGTCGAAGAGCAAGCGTCGGCGTAG
PROTEIN sequence
Length: 330
MNTNHGLQMPEGVQVEDASETFGRFEIEPLERGYGVTIGNALRRVLLSSLRGVAITALKIDGVQHEFSTVPGVTEDVSDIILNLKGVRFHTEELDDTSVHLDLEGPGTWTAADIAEATADYEVLNPEHHVATLAEDADLSIDLRLGRGRGYVDAEENEHDDDPIGVIAIDSIFTPILSVNYNVTPTRVGQKIAYEKLEVEIETDGSISAEDALTQAAAILRDHIGLFVELEGEPEPEPEEEEVDAEVQRIRELLAQPVDELDLSVRSHNCLKAASIKNIGDLVRREENEMLKFRNFGKKSLQELIEVLDDRGLQFGMDVEKYVEEQASA*