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sw_4_scaffold_215

Search features with annotation key words

Displaying 30 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_4_scaffold_215_1
Blastopirellula marina, Blastopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(3..464)
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZR72_9PLAN
Uncharacterized protein {ECO:0000313|EMBL:EAQ81168.1}; TaxID=314230 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Blastopirellula.;" source="Blastopirellula m
hypothetical protein
sw_4_scaffold_215_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(727..1167)
DNA (441bp) protein (147aa)
hypothetical protein
hypothetical protein; K09117 hypothetical protein id=24659829 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
GatB/Yqey domain superfamily {ECO:0000313|EMBL:ABC46105.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter
sw_4_scaffold_215_3
unknown

Not on your lists

1200..1379
DNA (180bp) protein (60aa)

This feature has no annotations

sw_4_scaffold_215_4
Gimesia maris, Gimesia, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(1556..3226)
DNA (1671bp) protein (557aa)
Heparan N-sulfatase n=1 Tax=Planctomyces maris DSM 8797 RepID=A6C1X7_9PLAN
Heparan N-sulfatase {ECO:0000313|EMBL:EDL61502.1}; TaxID=344747 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesia maris DSM 8797.;"
sulfatase
sw_4_scaffold_215_5
unknown

Not on your lists

comp(3319..3459)
DNA (141bp) protein (47aa)

This feature has no annotations

sw_4_scaffold_215_6
RBG_16_Aminicenantes_66_30_curated, Aminicenantes, Bacteria

Not on your lists

3648..6470
DNA (2823bp) protein (941aa)
id=17537874 Tax=RBG_16_Aminicenantes_66_30_curated
sw_4_scaffold_215_7
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(6479..9004)
DNA (2526bp) protein (842aa)
Alpha-L-rhamnosidase n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MFR0_RHOM4
alpha-L-rhamnosidase
Alpha-L-rhamnosidase {ECO:0000313|EMBL:ACY47587.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus marinus
sw_4_scaffold_215_8
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(9669..10100)
DNA (432bp) protein (144aa)
Zinc finger SWIM domain-containing protein n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SG98_RHOMR
zinc finger SWIM domain-containing protein
Zinc finger SWIM domain-containing protein {ECO:0000313|EMBL:AEN73299.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source
sw_4_scaffold_215_9
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


comp(10811..11611)
DNA (801bp) protein (267aa)
50S ribosomal protein L17 n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MGY2_RHOM4
50S ribosomal protein L17
50S ribosomal protein L17 {ECO:0000256|HAMAP-Rule:MF_01368, ECO:0000256|RuleBase:RU000661}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhod
sw_4_scaffold_215_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(11756..12745)
DNA (990bp) protein (330aa)
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059, ECO:0000313|EMBL:
DNA-directed RNA polymerase subunit alpha n=3 Tax=Salinibacter ruber RepID=RPOA_SALRD
rpoA; DNA-directed RNA polymerase subunit alpha
sw_4_scaffold_215_11
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


comp(12869..13471)
DNA (603bp) protein (201aa)
30S ribosomal protein S4 n=1 Tax=Salisaeta longa RepID=UPI0003B6340A
30S ribosomal protein S4
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus
sw_4_scaffold_215_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


comp(13576..13983)
DNA (408bp) protein (136aa)
30S ribosomal protein S11 n=1 Tax=Salisaeta longa RepID=UPI0003B779FB
rpsK; 30S ribosomal protein S11
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310, ECO:0000313|EMBL:CBH24180.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salini
sw_4_scaffold_215_13
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


comp(14084..14467)
DNA (384bp) protein (128aa)
30S ribosomal protein S13 n=1 Tax=Salisaeta longa RepID=UPI0003B72DBC
rpsM; 30S ribosomal protein S13
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315, ECO:0000313|EMBL:CBH24179.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salini
sw_4_scaffold_215_14
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(14802..15020)
DNA (219bp) protein (73aa)
infA; translation initiation factor IF-1
infA; translation initiation factor IF-1; K02518 translation initiation factor IF-1 id=24658979 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Translation initiation factor IF-1 {ECO:0000255|HAMAP-Rule:MF_00075}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Sa
sw_4_scaffold_215_15
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(15086..15994)
DNA (909bp) protein (303aa)
methionine aminopeptidase, type I (EC:3.4.11.18)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974
methionine aminopeptidase n=1 Tax=Salisaeta longa RepID=UPI0003B6D19B
sw_4_scaffold_215_16
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


comp(16094..17416)
DNA (1323bp) protein (441aa)
preprotein translocase subunit SecY n=1 Tax=Salisaeta longa RepID=UPI0003B63FAD
preprotein translocase subunit SecY
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465, ECO:0000256|RuleBase:RU000537}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermacea
sw_4_scaffold_215_17
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


comp(17512..17973)
DNA (462bp) protein (154aa)
50S ribosomal protein L15 n=1 Tax=Salisaeta longa RepID=UPI0003B514E2
50S ribosomal protein L15
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341, ECO:0000256|RuleBase:RU003889}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhod
sw_4_scaffold_215_18
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


comp(18214..18723)
DNA (510bp) protein (170aa)
30S ribosomal protein S5 n=1 Tax=Salisaeta longa RepID=UPI0003B39501
rpsE; 30S ribosomal protein S5
30S ribosomal protein S5 {ECO:0000255|HAMAP-Rule:MF_01307}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter
sw_4_scaffold_215_19
Aphanocapsa montana, Aphanocapsa, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists


comp(18844..19164)
DNA (321bp) protein (107aa)
50S ribosomal protein L18 n=1 Tax=Salisaeta longa RepID=UPI0003B58E36
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=1574475 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Aphanocapsa.;" source="Aphanocapsa montana BDHKU21000
50S ribosomal protein L18
sw_4_scaffold_215_20
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


comp(19302..19859)
DNA (558bp) protein (186aa)
50S ribosomal protein L6 n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MGW9_RHOM4
50S ribosomal protein L6
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodo
sw_4_scaffold_215_21
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


comp(19984..20385)
DNA (402bp) protein (134aa)
30S ribosomal protein S8 n=1 Tax=Salisaeta longa RepID=UPI0003B5AAE1
rpsH; 30S ribosomal protein S8
30S ribosomal protein S8 {ECO:0000255|HAMAP-Rule:MF_01302}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter
sw_4_scaffold_215_22
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


comp(20474..20743)
DNA (270bp) protein (90aa)
30S ribosomal protein S14 n=1 Tax=Salisaeta longa RepID=UPI0003B52839
rpS; 30S ribosomal protein S14
30S ribosomal protein S14; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (strain DSM 13855 / M31).;
sw_4_scaffold_215_23
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


comp(20769..21524)
DNA (756bp) protein (252aa)
rplE; 50S ribosomal protein L5
rplE; 50S ribosomal protein L5; K02931 large subunit ribosomal protein L5 id=24658970 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333, ECO:0000256|RuleBase:RU003931}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salin
sw_4_scaffold_215_24
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


comp(21803..22138)
DNA (336bp) protein (112aa)
50S ribosomal protein L24 n=2 Tax=Rhodothermus marinus RepID=D0MGW5_RHOM4
50S ribosomal protein L24
50S ribosomal protein L24 {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermu
sw_4_scaffold_215_25
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(22235..22603)
DNA (369bp) protein (123aa)
50S ribosomal protein L14 n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KSC8_SOLCM
50S ribosomal protein L14
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367, ECO:0000256|RuleBase:RU003950}; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; So
sw_4_scaffold_215_26
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


comp(22694..23158)
DNA (465bp) protein (155aa)
30S ribosomal protein S17 n=1 Tax=Salisaeta longa RepID=UPI0003B77CE2
rpsQ; 30S ribosomal protein S17
30S ribosomal protein S17 {ECO:0000256|HAMAP-Rule:MF_01345, ECO:0000256|RuleBase:RU003873}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Sali
sw_4_scaffold_215_27
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


comp(23236..23439)
DNA (204bp) protein (68aa)
50S ribosomal protein L29 n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MGW2_RHOM4
50S ribosomal protein L29
50S ribosomal protein L29 {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermu
sw_4_scaffold_215_28
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


comp(23538..23975)
DNA (438bp) protein (146aa)
50S ribosomal protein L16 n=1 Tax=Salisaeta longa RepID=UPI0003B5FDE9
50S ribosomal protein L16
50S ribosomal protein L16 {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhod
sw_4_scaffold_215_29
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


comp(24085..24789)
DNA (705bp) protein (235aa)
30S ribosomal protein S3 n=1 Tax=Salisaeta longa RepID=UPI0003B49528
rpsC; 30S ribosomal protein S3
30S ribosomal protein S3 {ECO:0000255|HAMAP-Rule:MF_01309}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter
sw_4_scaffold_215_30
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


comp(24849..25217)
DNA (369bp) protein (123aa)
50S ribosomal protein L22 n=2 Tax=Rhodothermus marinus RepID=D0MGV9_RHOM4
50S ribosomal protein L22
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004008}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhod
Displaying 30 items

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