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sw_4_scaffold_273_13

Organism: SW_4_Bacteroidetes_Order_II__Incertae_sedis_67_19

near complete RP 46 / 55 MC: 1 BSCG 47 / 51 ASCG 12 / 38 MC: 1
Location: comp(11447..12190)

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease Z {ECO:0000256|HAMAP-Rule:MF_01818}; Short=RNase Z {ECO:0000256|HAMAP-Rule:MF_01818};; EC=3.1.26.11 {ECO:0000256|HAMAP-Rule:MF_01818};; tRNA 3 endonuclease {ECO:0000256|HAMAP-Rule:MF_0181 similarity UNIPROT
DB: UniProtKB
  • Identity: 58.3
  • Coverage: 247.0
  • Bit_score: 275
  • Evalue 7.10e-71
Ribonuclease Z n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0ME97_RHOM4 similarity UNIREF
DB: UNIREF100
  • Identity: 58.3
  • Coverage: 247.0
  • Bit_score: 275
  • Evalue 5.10e-71
ribonuclease Z similarity KEGG
DB: KEGG
  • Identity: 58.3
  • Coverage: 247.0
  • Bit_score: 275
  • Evalue 1.40e-71

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Taxonomy

Rhodothermus marinus → Rhodothermus → Bacteroidetes Order II. Incertae sedis → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 744
ATGGGCGTGATCTCGACGCTGGCCCTGCTGGACCGCGACGAGCCGCTGGTGGTCGTGGGGCCGGCCGGCACCGAGGAGGCGGTGCGCGCCATGCCCGGCCTGGCCAATGACTGGCTGCCCTACGAGGTGGACTACCGCGAGCTGCCGGAGGACTTTTCGCCGCAGACCGTCTACGAGACCGGCGAGTTTGCCGTCACCGTGCGCCCGGTCGAGCACCGCGTGCCGTGCATGGGTTTTCGCTTCGAAGAACGGACGCGCGCTGGTCACCTCGACGCCGAGAAGGCGCGCCGCCTGGGAGCGACCGAGCACGAGCACCTGCGCGCCCTCAAGCGCGGGGAGCGCGTGGCGCTGGAAAACGGCGGTACCGTCGACCCGGCGGACGTGCTGGGGCCGGAGCGCCCGGGCGTTTCCTTCGCCTACGTGATGGACACGCGCCCCTGCGAGGCGGGCCGCACGCTGGCCGACGGCGTGGACCTCTTGTACCACGAGGCCACCTTCGGCGACGACCAGGCCGAGCGCGCCGCCGACACGGGCCACTCCACCGCGCGCCAGGCCGCCCGGCTGGCGAAGGACGCCGGCGCCGGGCGGCTGCTGCTCGGCCACTTCAGCGCGCGCTACGATACGCCCGCCCCGCTGGTCGAGGAAGCGCAGGCCGTCTTCCCAAACACGGCGGCGGCGGAGGAACTGAAACGCTACGTGCTCGACCCGCGCGAAAAGGACGTCTCCCGCCGGAGCGAGACATAG
PROTEIN sequence
Length: 248
MGVISTLALLDRDEPLVVVGPAGTEEAVRAMPGLANDWLPYEVDYRELPEDFSPQTVYETGEFAVTVRPVEHRVPCMGFRFEERTRAGHLDAEKARRLGATEHEHLRALKRGERVALENGGTVDPADVLGPERPGVSFAYVMDTRPCEAGRTLADGVDLLYHEATFGDDQAERAADTGHSTARQAARLAKDAGAGRLLLGHFSARYDTPAPLVEEAQAVFPNTAAAEELKRYVLDPREKDVSRRSET*