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sw_4_scaffold_273

Search features with annotation key words

Displaying 22 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_4_scaffold_273_1
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

2..181
DNA (180bp) protein (60aa)
Prevent-host-death family protein n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SIS6_RHOMR
prevent-host-death family protein
Prevent-host-death family protein {ECO:0000313|EMBL:AEN72704.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodoth
sw_4_scaffold_273_2
Deinococcus peraridilitoris, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

450..2357
DNA (1908bp) protein (636aa)
Zn-dependent hydrolase, glyoxylase n=1 Tax=Deinococcus peraridilitoris (strain DSM 19664 / LMG 22246 / CIP 109416 / KR-200) RepID=L0A3C6_DEIPD
Zn-dependent hydrolase
Zn-dependent hydrolase, glyoxylase {ECO:0000313|EMBL:AFZ67944.1}; TaxID=937777 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="Deinococcus per
sw_4_scaffold_273_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(2480..3622)
DNA (1143bp) protein (381aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B2FF6F
hypothetical protein
Tetratricopeptide repeat family protein {ECO:0000313|EMBL:ABC45722.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="S
sw_4_scaffold_273_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(3707..4414)
DNA (708bp) protein (236aa)
RNA polymerase sigma-70 factor
RNA polymerase sigma-70 factor id=24656815 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
RNA polymerase sigma-70 factor, putative {ECO:0000313|EMBL:ABC45273.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="
sw_4_scaffold_273_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


4674..5123
DNA (450bp) protein (150aa)
50S ribosomal protein L13 n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H4K2_SALRM
rplM; 50S ribosomal protein L13
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366, ECO:0000256|SAAS:SAAS00083943}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Sali
sw_4_scaffold_273_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


5248..5637
DNA (390bp) protein (130aa)
30S ribosomal protein S9 n=2 Tax=Salinibacter ruber RepID=D5H4K1_SALRM
rpsI; 30S ribosomal protein S9
30S ribosomal protein S9 {ECO:0000256|HAMAP-Rule:MF_00532, ECO:0000256|RuleBase:RU003816}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salin
sw_4_scaffold_273_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


5819..6937
DNA (1119bp) protein (373aa)
30S ribosomal protein S2 n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H4K0_SALRM
rpsB; 30S ribosomal protein S2
30S ribosomal protein S2 {ECO:0000256|HAMAP-Rule:MF_00291, ECO:0000313|EMBL:CBH22955.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinib
sw_4_scaffold_273_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

7068..7925
DNA (858bp) protein (286aa)
tsf; translation elongation factor Ts
tsf; translation elongation factor Ts; K02357 elongation factor Ts id=24656843 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Elongation factor Ts {ECO:0000255|HAMAP-Rule:MF_00050}; Short=EF-Ts {ECO:0000255|HAMAP-Rule:MF_00050};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodother
sw_4_scaffold_273_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

7999..8982
DNA (984bp) protein (328aa)
Uridylate kinase {ECO:0000255|HAMAP-Rule:MF_01220}; Short=UK {ECO:0000255|HAMAP-Rule:MF_01220};; EC=2.7.4.22 {ECO:0000255|HAMAP-Rule:MF_01220};; Uridine monophosphate kinase {ECO:0000255|HAMAP-Rule:MF
Uridylate kinase n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=PYRH_SALRD
pyrH; uridylate kinase
sw_4_scaffold_273_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

9198..9767
DNA (570bp) protein (190aa)
Ribosome-recycling factor n=2 Tax=Salinibacter ruber RepID=RRF_SALRD
frr; ribosome recycling factor
Ribosome-recycling factor {ECO:0000256|HAMAP-Rule:MF_00040}; Short=RRF {ECO:0000256|HAMAP-Rule:MF_00040};; Ribosome-releasing factor {ECO:0000256|HAMAP-Rule:MF_00040}; TaxID=761659 species="Bacteria;
sw_4_scaffold_273_trna_1
unknown

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9897..9984
DNA (88bp)
transferRNA
sw_4_scaffold_273_11
unknown

Not on your lists

10046..10345
DNA (300bp) protein (100aa)

This feature has no annotations

sw_4_scaffold_273_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

10539..11426
DNA (888bp) protein (296aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H4J6_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH22951.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_4_scaffold_273_13
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(11447..12190)
DNA (744bp) protein (248aa)
Ribonuclease Z {ECO:0000256|HAMAP-Rule:MF_01818}; Short=RNase Z {ECO:0000256|HAMAP-Rule:MF_01818};; EC=3.1.26.11 {ECO:0000256|HAMAP-Rule:MF_01818};; tRNA 3 endonuclease {ECO:0000256|HAMAP-Rule:MF_0181
Ribonuclease Z n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0ME97_RHOM4
ribonuclease Z
sw_4_scaffold_273_14
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(12181..14739)
DNA (2559bp) protein (853aa)
ABC transporter, ATP-binding protein, MDR family n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S0L1_SALRD
ABC transporter ATP-binding protein/permease
ABC transporter, ATP-binding/permease protein {ECO:0000313|EMBL:CBH25307.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" sou
sw_4_scaffold_273_15
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(15094..15882)
DNA (789bp) protein (263aa)
enoyl-CoA hydratase n=1 Tax=Salisaeta longa RepID=UPI0003B35379
enoyl-CoA hydratase/isomerase
Enoyl-CoA hydratase/isomerase {ECO:0000313|EMBL:ACY49083.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermu
sw_4_scaffold_273_16
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(16113..17063)
DNA (951bp) protein (317aa)
fmt; methionyl-tRNA formyltransferase; K00604 methionyl-tRNA formyltransferase [EC:2.1.2.9] id=24658112 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Methionyl-tRNA formyltransferase {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00043681}; EC=2.1.2.9 {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00150580};; TaxID=761659 species="B
fmt; methionyl-tRNA formyltransferase
sw_4_scaffold_273_17
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(17312..18340)
DNA (1029bp) protein (343aa)
Signal recognition particle receptor FtsY n=2 Tax=Salinibacter ruber RepID=D5HBA9_SALRM
ftsY; signal recognition particle GTPase
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order I
sw_4_scaffold_273_18
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(18365..19186)
DNA (822bp) protein (274aa)
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase {ECO:0000313|EMBL:CBH25315.1}; EC=2.7.8.5 {ECO:0000313|EMBL:CBH25315.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidete
CDP-alcohol phosphatidyltransferase n=1 Tax=Salisaeta longa RepID=UPI0003B70F79
pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
sw_4_scaffold_273_19
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

20009..20851
DNA (843bp) protein (281aa)
UspA domain-containing protein n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SDZ3_RHOMR
UspA domain-containing protein
UspA domain-containing protein {ECO:0000313|EMBL:AEN71985.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodotherm
sw_4_scaffold_273_20
R_Gamma2_65_16, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20870..21100)
DNA (231bp) protein (77aa)
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Gamma2_65_16_curated
Glr0386 protein id=1753052 bin=GWD2_Deltaproteobacteria_55_8 species=Gloeobacter violaceus genus=Gloeobacter taxon_order=Gloeobacterales taxon_class=Gloeobacteria phylum=Cyanobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
sw_4_scaffold_273_21
unknown

Not on your lists

comp(21093..21173)
DNA (81bp) protein (27aa)

This feature has no annotations

Displaying 22 items

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