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sw_4_scaffold_1036

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_4_scaffold_1036_1
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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2..364
DNA (363bp) protein (121aa)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000256|RuleBase:RU000618}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000256|RuleBase:RU000618};; Polydeoxyribonucleotide synthase [NAD(+)] {EC
DNA ligase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H7J3_SALRM
ligA; NAD-dependent DNA ligase
sw_4_scaffold_1036_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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754..1038
DNA (285bp) protein (95aa)
hypothetical protein
hypothetical protein id=24657566 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:ABC44753.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_4_scaffold_1036_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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1072..1584
DNA (513bp) protein (171aa)
GAF domain-containing protein
GAF domain-containing protein; K07170 GAF domain-containing protein id=24657565 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
GAF domain protein {ECO:0000313|EMBL:ABC45163.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (st
sw_4_scaffold_1036_4
Geobacillus stearothermophilus, Geobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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1692..1931
DNA (240bp) protein (80aa)
RNA polymerase sigma factor SigW {ECO:0000313|EMBL:EZP79151.1}; TaxID=1295642 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Geobacillus.;" source="Geobacillus stearothermophilus NUB
ECF subfamily RNA polymerase sigma-24 factor
RNA polymerase, sigma-24 subunit, ECF subfamily id=1891284 bin=GWE2_Bacteroidetes_42_39 species=Chitinophaga pinensis genus=Chitinophaga taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_39 organism_group=Bacteroidetes organism_desc=Good +
sw_4_scaffold_1036_5
unknown

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1928..2116
DNA (189bp) protein (63aa)

This feature has no annotations

sw_4_scaffold_1036_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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2136..3275
DNA (1140bp) protein (380aa)
Extracellular solute-binding protein, family 7 n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H7H9_SALRM
extracellular solute-binding protein
Extracellular solute-binding protein, family 7 {ECO:0000313|EMBL:CBH23984.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" so
sw_4_scaffold_1036_7
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

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3501..3770
DNA (270bp) protein (90aa)
hypothetical protein n=1 Tax=Chlorogloeopsis RepID=UPI00031D5567
protein of unknown function DUF433 Tax=RBG_16_Betaproteobacteria_64_18_curated
protein of unknown function DUF433
sw_4_scaffold_1036_8
Nostoc punctiforme, Nostoc, Nostocales, Cyanobacteria, Bacteria

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3767..4099
DNA (333bp) protein (111aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B3D500
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACC84462.1}; TaxID=63737 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Nostoc.;" source="Nostoc punctiforme (strain ATCC 29133 / PCC 73102).;"
sw_4_scaffold_1036_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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4231..5187
DNA (957bp) protein (319aa)
Predicted transcriptional regulator n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H7H5_SALRM
transcriptional regulator
Predicted transcriptional regulator {ECO:0000313|EMBL:CBH23980.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salin
sw_4_scaffold_1036_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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5204..5749
DNA (546bp) protein (182aa)
Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H7H4_SALRM
alpha/beta hydrolase
Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) {ECO:0000313|EMBL:CBH23979.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodot
sw_4_scaffold_1036_11
R_RIF_OD1_12_48_26, RIF-OD1-12, Parcubacteria, Bacteria

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5755..6144
DNA (390bp) protein (130aa)
gatA; aspartyl/glutamyl-tRNA amidotransferase subunit A (EC:6.3.5.-); K02433 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_4
aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A (EC:6.3.5.6 6.3.5.7)
glutamyl-tRNA(Gln) amidotransferase n=1 Tax=Thermodesulfatator atlanticus RepID=UPI0003B2F040
Displaying 11 items

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