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sw_4_scaffold_161

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_4_scaffold_161_1
unknown

Not on your lists

comp(1..648)
DNA (648bp) protein (216aa)

This feature has no annotations

sw_4_scaffold_161_2
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(744..1814)
DNA (1071bp) protein (357aa)
Anti-FecI sigma factor, FecR n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MHL0_RHOM4
anti-FecI sigma factor FecR
Anti-FecI sigma factor, FecR {ECO:0000313|EMBL:ACY47968.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus
sw_4_scaffold_161_3
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

2110..2697
DNA (588bp) protein (196aa)
hypothetical protein n=1 Tax=Gracilimonas tropica RepID=UPI0003718161
ECF subfamily RNA polymerase sigma-24 subunit
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ACY47967.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" s
sw_4_scaffold_161_4

Not on your lists

2974..3369
DNA (396bp) protein (132aa)
Transposase n=1 Tax=uncultured archaeon GZfos11A10 RepID=Q64EL3_9ARCH
Transposase {ECO:0000313|EMBL:AAU82164.1}; TaxID=285399 species="Archaea; environmental samples.;" source="uncultured archaeon GZfos11A10.;"
sw_4_scaffold_161_5
Rubinisphaera brasiliensis, Rubinisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(3395..4048)
DNA (654bp) protein (218aa)
Arylsulfatase A and related enzymes (Fragment) n=1 Tax=uncultured Rhizobium sp. HF0500_35F13 RepID=E7C626_9RHIZ
sulfatase
Sulfatase {ECO:0000313|EMBL:ADY61043.1}; Flags: Precursor;; TaxID=756272 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rubinisphaera.;" source="Rubinisphaera
sw_4_scaffold_161_6
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

4407..7352
DNA (2946bp) protein (982aa)
hypothetical protein n=1 Tax=Rudanella lutea RepID=UPI00037E6A36
Membrane-bound dehydrogenase domain protein {ECO:0000313|EMBL:CCH56659.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi
membrane-bound dehydrogenase domain-containing protein
sw_4_scaffold_161_7
unknown

Not on your lists

comp(7275..7586)
DNA (312bp) protein (104aa)

This feature has no annotations

sw_4_scaffold_161_trna_1
unknown

Not on your lists

comp(7664..7737)
DNA (74bp)
transferRNA
sw_4_scaffold_161_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

7940..8923
DNA (984bp) protein (328aa)
hypothetical protein id=24659677 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
hypothetical protein
Membrane protein, putative {ECO:0000313|EMBL:ABC46070.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter r
sw_4_scaffold_161_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

8971..9342
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H9Y7_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24842.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_4_scaffold_161_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

9396..10214
DNA (819bp) protein (273aa)
Phosphatidate cytidylyltransferase {ECO:0000313|EMBL:ABC46108.1}; EC=2.7.7.41 {ECO:0000313|EMBL:ABC46108.1};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rho
Phosphatidate cytidylyltransferase n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S1U8_SALRD
cdsA; phosphatidate cytidylyltransferase
sw_4_scaffold_161_11
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

10436..10642
DNA (207bp) protein (69aa)
hypothetical protein
hypothetical protein id=24659674 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:ABC45955.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_4_scaffold_161_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

10988..12940
DNA (1953bp) protein (651aa)
DNA mismatch repair protein MutL n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H9Y5_SALRM
DNA mismatch repair protein MutL {ECO:0000256|HAMAP-Rule:MF_00149, ECO:0000256|SAAS:SAAS00058680}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermacea
mutL; DNA mismatch repair protein mutL
sw_4_scaffold_161_13
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(13016..13855)
DNA (840bp) protein (280aa)
Cytochrome c, class I n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MF52_RHOM4
cytochrome c, class I
Cytochrome c, class I {ECO:0000313|EMBL:ACY49308.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus marinu
sw_4_scaffold_161_14
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

13975..15006
DNA (1032bp) protein (344aa)
tRNA(Ile)-lysidine synthase {ECO:0000256|HAMAP-Rule:MF_01161, ECO:0000256|SAAS:SAAS00043109}; EC=6.3.4.19 {ECO:0000256|HAMAP-Rule:MF_01161, ECO:0000256|SAAS:SAAS00043112};; tRNA(Ile)-2-lysyl-cytidine
tRNA(Ile)-lysidine synthase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H9Y4_SALRM
tilS; tRNA(Ile)-lysidine synthetase
sw_4_scaffold_161_15
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

15019..15399
DNA (381bp) protein (127aa)
tRNA(Ile)-lysidine synthase {ECO:0000256|HAMAP-Rule:MF_01161, ECO:0000256|SAAS:SAAS00043109}; EC=6.3.4.19 {ECO:0000256|HAMAP-Rule:MF_01161, ECO:0000256|SAAS:SAAS00043112};; tRNA(Ile)-2-lysyl-cytidine
tRNA(Ile)-lysidine synthase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H9Y4_SALRM
mesJ; cell cycle protein MesJ
sw_4_scaffold_161_16
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

15461..16009
DNA (549bp) protein (183aa)
hpt; hypoxanthine phosphoribosyltransferase; K00760 hypoxanthine phosphoribosyltransferase [EC:2.4.2.8] id=24659671 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Hypoxanthine phosphoribosyltransferase {ECO:0000313|EMBL:ABC44161.1}; EC=2.4.2.8 {ECO:0000313|EMBL:ABC44161.1};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis;
hpt; hypoxanthine phosphoribosyltransferase
sw_4_scaffold_161_17
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

16202..17293
DNA (1092bp) protein (364aa)
Asparaginase {ECO:0000313|EMBL:CBH24837.1}; EC=3.5.1.1 {ECO:0000313|EMBL:CBH24837.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibac
Asparaginase n=2 Tax=Salinibacter ruber RepID=D5H9Y2_SALRM
ansA; asparaginase
sw_4_scaffold_161_18
RIFOXYB12_FULL_Lentisphaerae_65_16_curated, Lentisphaerae, Bacteria

Not on your lists

17374..18528
DNA (1155bp) protein (385aa)
indolepyruvate oxidoreductase subunit IorA (EC:1.2.7.8); K00179 indolepyruvate ferredoxin oxidoreductase, alpha subunit [EC:1.2.7.8] Tax=RIFOXYB12_FULL_Lentisphaerae_65_16_curated
Indolepyruvate oxidoreductase subunit IorA (EC:1.2.7.8)
Indolepyruvate oxidoreductase subunit IorA n=1 Tax=Spirochaeta sp. L21-RPul-D2 RepID=V5WEZ7_9SPIO
sw_4_scaffold_161_19
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(18569..19984)
DNA (1416bp) protein (472aa)
Tryptophanase {ECO:0000256|HAMAP-Rule:MF_00544, ECO:0000256|SAAS:SAAS00048909}; EC=4.1.99.1 {ECO:0000256|HAMAP-Rule:MF_00544, ECO:0000256|SAAS:SAAS00048909};; L-tryptophan indole-lyase {ECO:0000256|HA
Tryptophanase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H9Y1_SALRM
tnaA; tryptophanase
sw_4_scaffold_161_20
unknown

Not on your lists

20817..21080
DNA (264bp) protein (88aa)

This feature has no annotations

sw_4_scaffold_161_21
RBG_16_KB1_OP1_55_9_curated, KB1, Bacteria

Not on your lists

21088..21939
DNA (852bp) protein (284aa)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0SV38_9EURY
tRNA methyl transferase-like protein; K06864 uncharacterized protein Tax=RBG_16_KB1_OP1_55_9_curated
TIGR00268 family protein
sw_4_scaffold_161_22
Dictyoglomus turgidum, Dictyoglomus, Dictyoglomales, Dictyoglomia, Dictyoglomi, Bacteria

Not on your lists

21920..22690
DNA (771bp) protein (257aa)
1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase n=1 Tax=Dictyoglomus turgidum (strain Z-1310 / DSM 6724) RepID=B8E2H5_DICTD
1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase
1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase {ECO:0000313|EMBL:ACK42819.1}; TaxID=515635 species="Bacteria; Dictyoglomi; Dictyoglomales; Dictyoglomaceae; Dictyoglomus.;" sour
sw_4_scaffold_161_23
uncultured Acetothermia bacterium, Acetothermia, Bacteria

Not on your lists

22726..23997
DNA (1272bp) protein (424aa)
UPF0272 protein HGMM_F36B04C39/HGMM_OP4C759 n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SUC3_9BACT
UPF0272 protein HGMM_F36B04C39 {ECO:0000256|HAMAP-Rule:MF_01074}; TaxID=236499 species="Bacteria; Acetothermia; environmental samples.;" source="uncultured Acetothermia bacterium.;"
hypothetical protein
sw_4_scaffold_161_24
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24720..25523
DNA (804bp) protein (268aa)
hypothetical protein n=1 Tax=Pleurocapsa sp. PCC 7319 RepID=UPI000345003F
aldo/keto reductase Tax=GWE2_Bacteroidetes_42_39_curated
aldo/keto reductase
sw_4_scaffold_161_25
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(25606..26130)
DNA (525bp) protein (175aa)
Putative ECF-subfamily sigma factor n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H9Y0_SALRM
ECF-subfamily sigma factor
Putative ECF-subfamily sigma factor {ECO:0000313|EMBL:CBH24835.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salin
sw_4_scaffold_161_26
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(26551..27864)
DNA (1314bp) protein (438aa)
Phosphohydrolase n=2 Tax=Salinibacter ruber RepID=D5H9X8_SALRM
phosphohydrolase
Phosphohydrolase {ECO:0000313|EMBL:CBH24833.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (stra
sw_4_scaffold_161_27
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(28012..28878)
DNA (867bp) protein (289aa)
lipase; K01046 triacylglycerol lipase [EC:3.1.1.3] id=24659666 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
lipase
Putative secreted lipase {ECO:0000313|EMBL:ABC44319.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rub
sw_4_scaffold_161_28
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(28978..29643)
DNA (666bp) protein (222aa)
Phosphatidate cytidylyltransferase {ECO:0000313|EMBL:ABC45314.1}; EC=2.7.7.41 {ECO:0000313|EMBL:ABC45314.1};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rho
Phosphatidate cytidylyltransferase n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S1V8_SALRD
cdsA; phosphatidate cytidylyltransferase
sw_4_scaffold_161_29
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

29827..30711
DNA (885bp) protein (295aa)
Carboxymethylenebutenolidase {ECO:0000313|EMBL:CBH24830.1}; EC=3.1.1.45 {ECO:0000313|EMBL:CBH24830.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodother
Carboxymethylenebutenolidase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H9X5_SALRM
clcD; carboxymethylenebutenolidase
Displaying items 1-30 of 32 in total

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