ggKbase home page

sw_4_scaffold_207

Search features with annotation key words

Displaying 22 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_4_scaffold_207_1
unknown

Not on your lists

2..121
DNA (120bp) protein (40aa)

This feature has no annotations

sw_4_scaffold_207_2
Gimesia maris, Gimesia, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

250..1221
DNA (972bp) protein (324aa)
Uncharacterized protein n=1 Tax=Planctomyces maris DSM 8797 RepID=A6BZ48_9PLAN
Uncharacterized protein {ECO:0000313|EMBL:EDL62343.1}; TaxID=344747 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesia maris DSM 8797.;"
Predicted Fe-S oxidoreductase
sw_4_scaffold_207_3
Gimesia maris, Gimesia, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

1294..2799
DNA (1506bp) protein (502aa)
Putative halogenase n=1 Tax=Planctomyces maris DSM 8797 RepID=A6CAA0_9PLAN
Putative halogenase {ECO:0000313|EMBL:EDL58379.1}; TaxID=344747 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesia maris DSM 8797.;"
tryptophan halogenase
sw_4_scaffold_207_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

3406..4380
DNA (975bp) protein (325aa)
Ribonucleoside-diphosphate reductase beta subunit {ECO:0000313|EMBL:CBH23074.1}; EC=1.17.4.1 {ECO:0000313|EMBL:CBH23074.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Ince
Ribonucleoside-diphosphate reductase beta subunit n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H4W9_SALRM
nrdB; ribonucleoside-diphosphate reductase subunit beta
sw_4_scaffold_207_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

4455..6137
DNA (1683bp) protein (561aa)
Ribonucleoside-diphosphate reductase large chain {ECO:0000313|EMBL:CBH23075.1}; EC=1.17.4.1 {ECO:0000313|EMBL:CBH23075.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incer
Ribonucleoside-diphosphate reductase large chain n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H4X0_SALRM
nrdA; ribonucleoside-diphosphate reductase large chain
sw_4_scaffold_207_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

6445..8394
DNA (1950bp) protein (650aa)
TonB-dependent receptor domain protein n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2RZ04_SALRD
TonB-dependent receptor domain-containing protein
TonB-dependent receptor domain protein {ECO:0000313|EMBL:ABC44263.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Sa
sw_4_scaffold_207_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

8526..10772
DNA (2247bp) protein (749aa)
mcrA; helicase id=24658233 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Putative helicase {ECO:0000313|EMBL:CBH25436.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (str
mcrA; helicase
sw_4_scaffold_207_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

10969..11865
DNA (897bp) protein (299aa)
Uncharacterized protein n=2 Tax=Salinibacter ruber RepID=D5HBN2_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH25437.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_4_scaffold_207_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(11910..13232)
DNA (1323bp) protein (441aa)
matE; MATE efflux family protein
matE; MATE efflux family protein id=24658235 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
MATE efflux family protein {ECO:0000313|EMBL:CBH25438.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter r
sw_4_scaffold_207_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

13580..14254
DNA (675bp) protein (225aa)
drrA; response regulator DrrA
Response regulator DrrA {ECO:0000313|EMBL:ABC43949.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
drrA; response regulator DrrA; K07658 two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP id=24658236 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
sw_4_scaffold_207_11
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

14410..15492
DNA (1083bp) protein (361aa)
ABC-type phosphate transport system, periplasmic component n=2 Tax=Salinibacter ruber RepID=D5HBN5_SALRM
pstS; phosphate ABC transporter substrate-binding protein
ABC-type phosphate transport system, periplasmic component {ECO:0000313|EMBL:CBH25440.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salini
sw_4_scaffold_207_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

15549..16514
DNA (966bp) protein (322aa)
pstC; phosphate ABC transporter permease
pstC; phosphate ABC transporter permease; K02037 phosphate transport system permease protein id=24658238 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
ABC-type phosphate transport system, permease component {ECO:0000313|EMBL:CBH25441.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibac
sw_4_scaffold_207_13
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

16615..17502
DNA (888bp) protein (296aa)
pstA; phosphate transport system permease protein pstA
pstA; phosphate transport system permease protein pstA; K02038 phosphate transport system permease protein id=24658239 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Phosphate ABC transporter, permease protein PstA {ECO:0000313|EMBL:ABC45651.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;"
sw_4_scaffold_207_14
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

17547..18440
DNA (894bp) protein (298aa)
Phosphate import ATP-binding protein PstB {ECO:0000256|HAMAP-Rule:MF_01702}; EC=3.6.3.27 {ECO:0000256|HAMAP-Rule:MF_01702, ECO:0000313|EMBL:CBH25443.1};; ABC phosphate transporter {ECO:0000256|HAMAP-R
Phosphate import ATP-binding protein pstB n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HBN8_SALRM
pstB; phosphate import ATP-binding protein pstB
sw_4_scaffold_207_15
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

18489..19214
DNA (726bp) protein (242aa)
phoU; phosphate uptake regulator
phoU; phosphate uptake regulator; K02039 phosphate transport system protein id=24658241 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Phosphate-specific transport system accessory protein PhoU {ECO:0000256|PIRNR:PIRNR003107}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Sali
sw_4_scaffold_207_16
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(19473..20714)
DNA (1242bp) protein (414aa)
3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II {ECO:0000313|EMBL:ABC43759.1}; EC=3.5.4.25 {ECO:0000313|EMBL:ABC43759.1};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroide
Riboflavin biosynthesis protein ribA n=2 Tax=Salinibacter ruber RepID=D5H4H9_SALRM
ribA; riboflavin biosynthesis protein ribA
sw_4_scaffold_207_17
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(20781..21116)
DNA (336bp) protein (112aa)
yajC; Preprotein translocase subunit YajC
yajC; Preprotein translocase subunit YajC; K03210 preprotein translocase subunit YajC id=24656822 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Preprotein translocase subunit YajC {ECO:0000313|EMBL:CBH22933.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salin
sw_4_scaffold_207_18
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

21716..22780
DNA (1065bp) protein (355aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H4H7_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH22932.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_4_scaffold_207_19
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(22869..23495)
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H4H6_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH22931.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_4_scaffold_207_20
unknown

Not on your lists

comp(23528..23797)
DNA (270bp) protein (90aa)

This feature has no annotations

sw_4_scaffold_207_21
Desulfobacter postgatei, Desulfobacter, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23797..24828)
DNA (1032bp) protein (344aa)
Transposase n=1 Tax=Desulfobacter postgatei 2ac9 RepID=I5AYK1_9DELT
Transposase {ECO:0000313|EMBL:EIM62314.1}; TaxID=879212 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacter.;" source="Desulfobacter postgatei
tnp5; putative ISH4 transposase
sw_4_scaffold_207_22
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

25236..26480
DNA (1245bp) protein (415aa)
ASPIC/UnbV domain protein n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MJI5_RHOM4
ASPIC/UnbV domain-containing protein
ASPIC/UnbV domain protein {ECO:0000313|EMBL:ACY48643.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus ma
Displaying 22 items

View Taxonomy