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sw_4_scaffold_229

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Displaying 22 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_4_scaffold_229_1
Haloferax prahovense, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(60..833)
DNA (774bp) protein (258aa)
atpB; A-type ATP synthase subunit B (EC:3.6.3.14)
V-type ATP synthase beta chain n=1 Tax=Haloferax prahovense DSM 18310 RepID=M0GR34_9EURY
V-type ATP synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00310}; V-ATPase subunit B {ECO:0000256|HAMAP-Rule:MF_00310}; TaxID=1227461 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Halo
sw_4_scaffold_229_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(1454..2467)
DNA (1014bp) protein (338aa)
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase n=2 Tax=Salinibacter ruber RepID=D5H7N0_SALRM
hypothetical protein
Truncated methionine synthase-like protein {ECO:0000313|EMBL:ABC45913.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source
sw_4_scaffold_229_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

2603..3406
DNA (804bp) protein (268aa)
fecB; Fe3+-siderophores ABC transporter
fecB; Fe3+-siderophores ABC transporter id=24657803 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
ABC-type Fe3+-siderophores transport systems {ECO:0000313|EMBL:ABC45629.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" sour
sw_4_scaffold_229_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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3554..4783
DNA (1230bp) protein (410aa)
Renal dipeptidase superfamily n=2 Tax=Salinibacter ruber RepID=D5H7M8_SALRM
rDP; dipeptidase
Renal dipeptidase superfamily {ECO:0000313|EMBL:ABC46244.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacte
sw_4_scaffold_229_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(4832..6097)
DNA (1266bp) protein (422aa)
recD; deoxyribonuclease; K01144 exodeoxyribonuclease V [EC:3.1.11.5] id=24657801 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Putative deoxyribonuclease {ECO:0000313|EMBL:CBH24032.1}; EC=3.1.11.5 {ECO:0000313|EMBL:CBH24032.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodotherma
recD; deoxyribonuclease
sw_4_scaffold_229_trna_1
unknown

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comp(6241..6336)
DNA (96bp)
transferRNA
sw_4_scaffold_229_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(6439..7365)
DNA (927bp) protein (309aa)
ATP synthase gamma chain n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H7M5_SALRM
atpG; ATP synthase subunit gamma
ATP synthase gamma chain {ECO:0000256|HAMAP-Rule:MF_00815, ECO:0000313|EMBL:CBH24030.1}; ATP synthase F1 sector gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; F-ATPase gamma subunit {ECO:0000256|HAM
sw_4_scaffold_229_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(7534..9183)
DNA (1650bp) protein (550aa)
ATP synthase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01346, ECO:0000313|EMBL:CBH24029.1};; ATP synthase F1 sector subunit alpha {ECO:0000256|HAMAP-Rule:
ATP synthase subunit alpha n=2 Tax=Salinibacter ruber RepID=ATPA_SALRD
atpA; ATP synthase subunit alpha
sw_4_scaffold_229_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(9373..9951)
DNA (579bp) protein (193aa)
atpH; ATP synthase subunit delta; K02113 F-type H+-transporting ATPase subunit delta [EC:3.6.3.14] id=24657797 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
atpH; ATP synthase subunit delta
ATP synthase subunit delta {ECO:0000255|HAMAP-Rule:MF_01416}; ATP synthase F(1) sector subunit delta {ECO:0000255|HAMAP-Rule:MF_01416}; F-type ATPase subunit delta {ECO:0000255|HAMAP-Rule:MF_01416}; S
sw_4_scaffold_229_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(10010..10519)
DNA (510bp) protein (170aa)
atpF; ATP synthase subunit B; K02109 F-type H+-transporting ATPase subunit b [EC:3.6.3.14] id=24657796 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
atpF; ATP synthase subunit B
ATP synthase subunit b {ECO:0000256|HAMAP-Rule:MF_01398, ECO:0000256|RuleBase:RU003849}; ATP synthase F(0) sector subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATPase subunit I {ECO:0000256|HAMAP-Rule:
sw_4_scaffold_229_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(10595..10831)
DNA (237bp) protein (79aa)
ATP synthase F0 subunit C n=1 Tax=Salisaeta longa RepID=UPI0003B6D118
atpH; ATP synthase subunit C
ATP synthase subunit c {ECO:0000256|SAAS:SAAS00242779}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rub
sw_4_scaffold_229_11
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(10916..12145)
DNA (1230bp) protein (410aa)
ATP synthase subunit a n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S436_SALRD
ATP synthase F0 subunit A
ATP synthase subunit a {ECO:0000256|HAMAP-Rule:MF_01393, ECO:0000256|RuleBase:RU000483}; ATP synthase F0 sector subunit a {ECO:0000256|HAMAP-Rule:MF_01393}; F-ATPase subunit 6 {ECO:0000256|HAMAP-Rule:
sw_4_scaffold_229_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(12193..12501)
DNA (309bp) protein (103aa)
hypothetical protein
hypothetical protein id=24657793 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH24024.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_4_scaffold_229_13
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(12701..12973)
DNA (273bp) protein (91aa)
hypothetical protein
hypothetical protein id=24657792 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH24023.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_4_scaffold_229_14
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(13055..13525)
DNA (471bp) protein (157aa)
Uncharacterized protein n=2 Tax=Salinibacter ruber RepID=D5H7L7_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24022.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_4_scaffold_229_15
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(14176..15078)
DNA (903bp) protein (301aa)
membrane peptidase
membrane peptidase id=24657790 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Putative membrane peptidase {ECO:0000313|EMBL:CBH24021.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter
sw_4_scaffold_229_16
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


15378..15632
DNA (255bp) protein (85aa)
rpsT; 30S ribosomal protein S20
rpsT; 30S ribosomal protein S20; K02968 small subunit ribosomal protein S20 id=24657789 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
30S ribosomal protein S20 {ECO:0000256|HAMAP-Rule:MF_00500, ECO:0000313|EMBL:CBH24020.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salini
sw_4_scaffold_229_17
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

16261..17250
DNA (990bp) protein (330aa)
PKD repeat protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H7L4_SALRM
PKD repeat protein
Conserved protein {ECO:0000313|EMBL:ABC45430.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (str
sw_4_scaffold_229_18
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(17372..18913)
DNA (1542bp) protein (514aa)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336};; Lysyl-tRNA synthetase {ECO:0000256|H
Lysine--tRNA ligase n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S442_SALRD
lysS; lysyl-tRNA synthetase
sw_4_scaffold_229_19
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(19084..19704)
DNA (621bp) protein (207aa)
hypothetical protein
hypothetical protein id=24657786 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH24017.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_4_scaffold_229_20
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(19914..20657)
DNA (744bp) protein (248aa)
NADP oxidoreductase coenzyme F420-dependent superfamily n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H7L1_SALRM
NADP oxidoreductase coenzyme F420-dependent superfamily
NADP oxidoreductase coenzyme F420-dependent superfamily {ECO:0000313|EMBL:CBH24016.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibac
sw_4_scaffold_229_21
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

20923..21423
DNA (501bp) protein (167aa)
ald; Alanine dehydrogenase; K00259 alanine dehydrogenase [EC:1.4.1.1] id=24657784 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Alanine dehydrogenase {ECO:0000313|EMBL:CBH24015.1}; EC=1.4.1.1 {ECO:0000313|EMBL:CBH24015.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae;
ald; Alanine dehydrogenase
Displaying 22 items

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