ggKbase home page

sw_4_scaffold_345

Search features with annotation key words

Displaying 12 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_4_scaffold_345_1
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(2..469)
DNA (468bp) protein (156aa)
Long-chain-fatty-acid--CoA ligase {ECO:0000313|EMBL:CBH24318.1}; EC=6.2.1.3 {ECO:0000313|EMBL:CBH24318.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodo
Long-chain-fatty-acid--CoA ligase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H8G3_SALRM
fadD; long-chain-fatty-acid--CoA ligase
sw_4_scaffold_345_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(534..1238)
DNA (705bp) protein (235aa)
HTH-type transcriptional regulator ttgR n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H8G2_SALRM
ttgR; TtgR family transcriptional regulator
HTH-type transcriptional regulator ttgR {ECO:0000313|EMBL:CBH24317.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="S
sw_4_scaffold_345_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(1486..2646)
DNA (1161bp) protein (387aa)
hypothetical protein
hypothetical protein id=24659151 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH24316.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_4_scaffold_345_4
unknown

Not on your lists

comp(2812..2997)
DNA (186bp) protein (62aa)

This feature has no annotations

sw_4_scaffold_345_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(3005..3253)
DNA (249bp) protein (83aa)
signal transducing histidine kinase
signal transducing histidine kinase id=24659150 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Signal transducing histidine kinase {ECO:0000313|EMBL:CBH24315.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salin
sw_4_scaffold_345_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(3328..4185)
DNA (858bp) protein (286aa)
Metallo-beta-lactamase superfamily protein n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S3A1_SALRD
metal-dependent hydrolase
Metal-dependent hydrolase {ECO:0000313|EMBL:CBH24314.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ru
sw_4_scaffold_345_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(4412..5053)
DNA (642bp) protein (214aa)
ATP-dependent protease {ECO:0000313|EMBL:CBH24313.1}; EC=3.4.21.53 {ECO:0000313|EMBL:CBH24313.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermacea
ATP-dependent protease n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H8F8_SALRM
lon; ATP-dependent protease
sw_4_scaffold_345_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(5332..6078)
DNA (747bp) protein (249aa)
lipoprotein-releasing system ATP-binding protein lolD; K09810 lipoprotein-releasing system ATP-binding protein [EC:3.6.3.-] id=24659147 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Lipoprotein-releasing system ATP-binding protein LolD {ECO:0000255|HAMAP-Rule:MF_01708}; EC=3.6.3.- {ECO:0000255|HAMAP-Rule:MF_01708};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Ord
lipoprotein-releasing system ATP-binding protein lolD
sw_4_scaffold_345_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(6222..7601)
DNA (1380bp) protein (460aa)
C4-dicarboxylate transport transcriptional regulatory protein n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S3A4_SALRD
dctD; C4-dicarboxylate transport transcriptional regulatory protein
C4-dicarboxylate transport transcriptional regulatory protein {ECO:0000313|EMBL:ABC44250.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Sal
sw_4_scaffold_345_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(7871..8584)
DNA (714bp) protein (238aa)
hypothetical protein id=24659145 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
hypothetical protein
Tetratricopeptide repeat domain protein {ECO:0000313|EMBL:ABC43637.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="S
sw_4_scaffold_345_11
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

8923..9939
DNA (1017bp) protein (339aa)
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361160}; EC=1.2.1.- {ECO:0000256|RuleBase:RU361160};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae s
Glyceraldehyde-3-phosphate dehydrogenase, type I n=2 Tax=Salinibacter ruber RepID=Q2S3A6_SALRD
gap; glyceraldehyde-3-phosphate dehydrogenase, type I
sw_4_scaffold_345_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

10031..11227
DNA (1197bp) protein (399aa)
pgk_tpi; Bifunctional PGK/TIM; K00927 phosphoglycerate kinase [EC:2.7.2.3] id=24659143 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Phosphoglycerate kinase {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532}; EC=2.7.2.3 {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532};; TaxID=761659 species="Bacteria;
pgk_tpi; Bifunctional PGK/TIM
Displaying 12 items

View Taxonomy