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sw_4_scaffold_377

Search features with annotation key words

Displaying 26 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_4_scaffold_377_1
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(1..357)
DNA (357bp) protein (119aa)
folE; GTP cyclohydrolase I; K01495 GTP cyclohydrolase I [EC:3.5.4.16] id=24658743 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
GTP cyclohydrolase 1 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021192}; EC=3.5.4.16 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021179};; GTP cyclohydrolase I {ECO:0000256|
folE; GTP cyclohydrolase I
sw_4_scaffold_377_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(409..822)
DNA (414bp) protein (138aa)
6-pyruvoyl-tetrahydropterin synthase; K01737 6-pyruvoyl tetrahydrobiopterin synthase [EC:4.2.3.12] id=24658742 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
6-carboxy-5,6,7,8-tetrahydropterin synthase {ECO:0000256|PIRNR:PIRNR006113}; EC=4.-.-.- {ECO:0000256|PIRNR:PIRNR006113};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incerta
6-pyruvoyl-tetrahydropterin synthase
sw_4_scaffold_377_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

1104..1448
DNA (345bp) protein (115aa)
hypothetical protein
HIT-like protein id=24658741 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Hypothetical HIT-like protein slr1234 {ECO:0000313|EMBL:ABC44152.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Sal
sw_4_scaffold_377_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

1544..2143
DNA (600bp) protein (200aa)
coaE; dephospho-CoA kinase; K00859 dephospho-CoA kinase [EC:2.7.1.24] id=24658740 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Dephospho-CoA kinase {ECO:0000255|HAMAP-Rule:MF_00376}; EC=2.7.1.24 {ECO:0000255|HAMAP-Rule:MF_00376};; Dephosphocoenzyme A kinase {ECO:0000255|HAMAP-Rule:MF_00376}; TaxID=309807 species="Bacteria; Ba
coaE; dephospho-CoA kinase
sw_4_scaffold_377_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

2756..3454
DNA (699bp) protein (233aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae;
phoR; Alkaline phosphatase synthesis sensor protein phoR
phoR; Alkaline phosphatase synthesis sensor protein phoR id=24658739 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
sw_4_scaffold_377_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

3683..4459
DNA (777bp) protein (259aa)
luxR; regulatory protein, LuxR:response regulator receiver
luxR; regulatory protein, LuxR:response regulator receiver id=24658738 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Regulatory protein, LuxR:Response regulator receiver {ECO:0000313|EMBL:CBH25927.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter
sw_4_scaffold_377_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

4750..5439
DNA (690bp) protein (230aa)
Two-component system response regulator n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HD20_SALRM
two-component system response regulator
Two-component system response regulator {ECO:0000313|EMBL:CBH25925.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="S
sw_4_scaffold_377_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(5946..6416)
DNA (471bp) protein (157aa)
hypothetical protein
hypothetical protein id=24657231 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH23377.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_4_scaffold_377_trna_1
unknown

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6610..6683
DNA (74bp)
transferRNA
sw_4_scaffold_377_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

6835..7104
DNA (270bp) protein (90aa)
hypothetical protein
hypothetical protein id=24657229 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH23375.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_4_scaffold_377_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(7108..7347)
DNA (240bp) protein (80aa)
hypothetical protein
hypothetical protein id=24657228 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH23374.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_4_scaffold_377_11
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(7344..7514)
DNA (171bp) protein (57aa)
Uncharacterized protein n=2 Tax=Salinibacter ruber RepID=D5H5R8_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH23373.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_4_scaffold_377_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(7778..9160)
DNA (1383bp) protein (461aa)
Probable oxidoreductase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HCB8_SALRM
oxidoreductase
Probable oxidoreductase {ECO:0000313|EMBL:CBH25673.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_4_scaffold_377_13
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(9515..11080)
DNA (1566bp) protein (522aa)
Sodium/glucose cotransporter n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H5R7_SALRM
sodium/glucose cotransporter
Sodium/glucose cotransporter {ECO:0000313|EMBL:CBH23372.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter
sw_4_scaffold_377_14
Joostella marina, Joostella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

11568..14882
DNA (3315bp) protein (1105aa)
TonB-linked outer membrane protein, SusC/RagA family n=1 Tax=Joostella marina DSM 19592 RepID=I3C9I0_9FLAO
TonB-linked outer membrane protein, SusC/RagA family {ECO:0000313|EMBL:EIJ40273.1}; Flags: Precursor;; TaxID=926559 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriacea
SusC/RagA family TonB-linked outer membrane protein
sw_4_scaffold_377_15
Pontibacter korlensis, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

14953..16911
DNA (1959bp) protein (653aa)
RagB/SusD domain protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PV76_CHIPD
carbohydrate-binding protein SusD
Carbohydrate-binding protein SusD {ECO:0000313|EMBL:AKD02276.1}; TaxID=400092 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter korlensis.;"
sw_4_scaffold_377_16

Not on your lists

17144..20473
DNA (3330bp) protein (1110aa)
RNA-binding protein n=1 Tax=Salisaeta longa RepID=UPI0003B75E45
Uncharacterized protein {ECO:0000313|EMBL:KKN32502.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
ASPIC/UnbV domain protein
sw_4_scaffold_377_17
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(20669..21445)
DNA (777bp) protein (259aa)
Uncharacterized protein n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MJ51_RHOM4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACY48509.1}; Flags: Precursor;; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source
sw_4_scaffold_377_18
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(21549..22871)
DNA (1323bp) protein (441aa)
Glycosyl hydrolase family 109 protein n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GF55_9BACT
Glycosyl hydrolase family 109 protein {ECO:0000313|EMBL:CCH52530.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.
oxidoreductase domain-containing protein
sw_4_scaffold_377_19
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(22909..23772)
DNA (864bp) protein (288aa)
N-acetylglucosamine kinase, putative n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S5L2_SALRD
N-acetylglucosamine kinase
N-acetylglucosamine kinase, putative {ECO:0000313|EMBL:ABC44085.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Sali
sw_4_scaffold_377_20
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(24245..27301)
DNA (3057bp) protein (1019aa)
Beta-N-acetylhexosaminidase {ECO:0000256|SAAS:SAAS00114579}; EC=3.2.1.52 {ECO:0000256|SAAS:SAAS00114579};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodot
Beta-N-acetylglucosaminidase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H5R5_SALRM
bglX; beta-N-acetylglucosaminidase
sw_4_scaffold_377_21
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(27492..29099)
DNA (1608bp) protein (536aa)
Na+/proline symporter n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S5L4_SALRD
putP; Na+/proline symporter
Na+/proline symporter {ECO:0000313|EMBL:CBH23369.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber
sw_4_scaffold_377_22
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29290..29469
DNA (180bp) protein (60aa)
hypothetical protein n=1 Tax=Smaragdicoccus niigatensis RepID=UPI0003616D0B
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
sw_4_scaffold_377_23
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

29779..30471
DNA (693bp) protein (231aa)
short-chain dehydrogenase
short-chain dehydrogenase id=24658727 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Probable short-chain dehydrogenase {ECO:0000313|EMBL:CBH25913.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salini
sw_4_scaffold_377_24
unknown

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comp(30552..30935)
DNA (384bp) protein (128aa)

This feature has no annotations

sw_4_scaffold_377_25
unknown

Not on your lists

comp(30932..31057)
DNA (126bp) protein (42aa)

This feature has no annotations

Displaying 26 items

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