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sw_4_scaffold_59

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_4_scaffold_59_1
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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3..416
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H6M8_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH23683.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_4_scaffold_59_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

479..1321
DNA (843bp) protein (281aa)
Sugar epimerase BlmG {ECO:0000313|EMBL:CBH23637.1}; EC=5.1.3.- {ECO:0000313|EMBL:CBH23637.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; S
Sugar epimerase BlmG n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H6I2_SALRM
wcaG; Sugar epimerase BlmG
sw_4_scaffold_59_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

1278..1577
DNA (300bp) protein (100aa)
Sugar epimerase BlmG {ECO:0000313|EMBL:CBH23637.1}; EC=5.1.3.- {ECO:0000313|EMBL:CBH23637.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; S
Sugar epimerase BlmG n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H6I2_SALRM
wcaG; Sugar epimerase BlmG
sw_4_scaffold_59_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(2071..3570)
DNA (1500bp) protein (500aa)
PKD domain protein n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2RYN4_SALRD
PKD domain-containing protein
PKD domain protein {ECO:0000313|EMBL:ABC44340.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (st
sw_4_scaffold_59_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

3831..5297
DNA (1467bp) protein (489aa)
Putative colanic acid biosynthesis glycosyl transferase n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S4X0_SALRD
colanic acid biosynthesis glycosyl transferase
Putative colanic acid biosynthesis glycosyl transferase {ECO:0000313|EMBL:ABC45543.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibac
sw_4_scaffold_59_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

5558..7486
DNA (1929bp) protein (643aa)
glycosyltransferase; K13685 UDP-N-acetylglucosamine:undecaprenyl-P N-acetylglucosaminyl 1-P transferase [EC:2.7.8.-] id=24657481 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
glycosyltransferase
Probable glycosyltransferase {ECO:0000313|EMBL:ABC44638.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter
sw_4_scaffold_59_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(7938..8615)
DNA (678bp) protein (226aa)
hypothetical protein
hypothetical protein id=24657037 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:ABC46153.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_4_scaffold_59_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(8726..9247)
DNA (522bp) protein (174aa)
Putative transcriptional regulator NusG/RfaH family n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HCX3_SALRM
NusG/RfaH family transcriptional regulator
Putative transcriptional regulator NusG/RfaH family {ECO:0000313|EMBL:CBH25878.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.
sw_4_scaffold_59_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

9546..10901
DNA (1356bp) protein (452aa)
Bacterial sugar transferase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H6Q4_SALRM
sugar transferase
Bacterial sugar transferase {ECO:0000313|EMBL:CBH23709.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter
sw_4_scaffold_59_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


11495..12508
DNA (1014bp) protein (338aa)
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016813}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00089474};; Phenylalanyl-t
Phenylalanine--tRNA ligase alpha subunit n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HD39_SALRM
pheS; phenylalanyl-tRNA synthetase subunit alpha
sw_4_scaffold_59_11
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

12732..15242
DNA (2511bp) protein (837aa)
Phenylalanine--tRNA ligase beta subunit {ECO:0000255|HAMAP-Rule:MF_00283}; EC=6.1.1.20 {ECO:0000255|HAMAP-Rule:MF_00283};; Phenylalanyl-tRNA synthetase beta subunit {ECO:0000255|HAMAP-Rule:MF_00283};
pheT; phenylalanyl-tRNA synthetase subunit beta; K01890 phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] id=24658755 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
pheT; phenylalanyl-tRNA synthetase subunit beta
sw_4_scaffold_59_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

15575..15982
DNA (408bp) protein (136aa)
dopamine receptor D4
dopamine receptor D4 id=24658756 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Dopamine receptor D4 {ECO:0000313|EMBL:ABC46345.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (
sw_4_scaffold_59_13
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

16025..16360
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HD42_SALRM
hypothetical protein
Cell division protein ZapA {ECO:0000256|SAAS:SAAS00072473}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter
sw_4_scaffold_59_14
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

16590..18593
DNA (2004bp) protein (668aa)
ABC transporter, ATP-binding protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HD43_SALRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:CBH25948.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Sali
ABC transporter ATP-binding protein
sw_4_scaffold_59_15
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

18887..20131
DNA (1245bp) protein (415aa)
hypothetical protein
hypothetical protein id=24658759 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:ABC45151.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_4_scaffold_59_16
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(20255..21988)
DNA (1734bp) protein (578aa)
Amidohydrolase family protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HD47_SALRM
amidohydrolase
Amidohydrolase family protein {ECO:0000313|EMBL:CBH25952.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacte
sw_4_scaffold_59_17
RIFOXYD12_FULL_Rhodospirillales_60_8_curated, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21994..22395)
DNA (402bp) protein (134aa)
hypothetical protein n=1 Tax=Synechococcus sp. PCC 7336 RepID=UPI000374ABC9
death-on-curing family protein; K07341 death on curing protein Tax=RIFOXYD12_FULL_Rhodospirillales_60_8_curated
death-on-curing family protein
sw_4_scaffold_59_18
RIFOXYD12_FULL_Rhodospirillales_60_8_curated, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22402..22626)
DNA (225bp) protein (75aa)
Transcriptional regulator n=1 Tax=Asticcacaulis benevestitus DSM 16100 = ATCC BAA-896 RepID=V4RIH7_9CAUL
transcriptional regulator/antitoxin MazE Tax=RIFOXYD12_FULL_Rhodospirillales_60_8_curated
putative addiction module antidote
sw_4_scaffold_59_19
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(23029..23586)
DNA (558bp) protein (186aa)
Thioredoxin, putative n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2RYS1_SALRD
thioredoxin
Thioredoxin, putative {ECO:0000313|EMBL:ABC45361.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber
sw_4_scaffold_59_20
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

23759..24880
DNA (1122bp) protein (374aa)
THUMP domain/methyltransferase domain-containing protein; K07444 putative N6-adenine-specific DNA methylase [EC:2.1.1.-] id=24658769 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
THUMP domain/methyltransferase domain-containing protein
THUMP domain/methyltransferase domain protein {ECO:0000313|EMBL:ABC45842.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" sou
sw_4_scaffold_59_21
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

25009..27207
DNA (2199bp) protein (733aa)
priA; primosomal protein N'; K04066 primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:3.6.4.-] id=24658692 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Primosomal protein N' {ECO:0000256|HAMAP-Rule:MF_00983}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00983};; ATP-dependent helicase PriA {ECO:0000256|HAMAP-Rule:MF_00983}; TaxID=309807 species="Bacteria; B
priA; primosomal protein N'
sw_4_scaffold_59_22
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

27267..27452
DNA (186bp) protein (62aa)
priA; primosomal protein N'; K04066 primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:3.6.4.-] id=24658692 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Primosomal protein N' {ECO:0000256|HAMAP-Rule:MF_00983}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00983};; ATP-dependent helicase PriA {ECO:0000256|HAMAP-Rule:MF_00983}; TaxID=761659 species="Bacteria; B
priA; Primosomal protein N'
sw_4_scaffold_59_23
RBG_13_Deltaproteobacteria_53_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27601..27993
DNA (393bp) protein (131aa)
Putative uncharacterized protein n=1 Tax=Desulfobacterium autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2) RepID=C0QBN9_DESAH
hypothetical protein
hypothetical protein Tax=RBG_13_Deltaproteobacteria_53_10_curated
sw_4_scaffold_59_24
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(28004..28711)
DNA (708bp) protein (236aa)
Phospholipase/Carboxylesterase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HCW8_SALRM
estA; phospholipase/carboxylesterase
Phospholipase/Carboxylesterase {ECO:0000313|EMBL:CBH25873.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibact
sw_4_scaffold_59_25
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(28845..29810)
DNA (966bp) protein (322aa)
Glyoxalase family protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HCW7_SALRM
glyoxalase family protein
Glyoxalase family protein {ECO:0000313|EMBL:CBH25872.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ru
Displaying 25 items

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