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sw_4_scaffold_96

Search features with annotation key words

Displaying 28 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_4_scaffold_96_1
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

3..98
DNA (96bp) protein (32aa)
Acyl-CoA dehydrogenase, C-terminal domain family {ECO:0000313|EMBL:ABC45705.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;"
sw_4_scaffold_96_2
RLO_PER_ii_53_10, PER-ii, Bacteria

Not on your lists

comp(119..718)
DNA (600bp) protein (200aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B3EED9
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_PER_ii_53_10_curated
hypothetical protein
sw_4_scaffold_96_3
GWF2_Lentisphaerae_45_14_curated, Lentisphaerae, Bacteria

Not on your lists

comp(941..1081)
DNA (141bp) protein (47aa)
hypothetical protein Tax=GWF2_Lentisphaerae_45_14_curated
sw_4_scaffold_96_4
Chlamydomonas reinhardtii, Chlamydomonas, Chlamydomonadales, Chlorophyceae, Chlorophyta, Viridiplantae

Not on your lists

comp(1114..1407)
DNA (294bp) protein (98aa)
Pyruvate phosphate dikinase {ECO:0000313|EMBL:EDP03507.1}; EC=2.7.9.1 {ECO:0000313|EMBL:EDP03507.1};; TaxID=3055 species="Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Chlam
pyruvate phosphate dikinase n=1 Tax=Salisaeta longa RepID=UPI0003B4C18B
pyruvate, phosphate dikinase
sw_4_scaffold_96_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

1748..2179
DNA (432bp) protein (144aa)
Starvation induced DNA binding protein n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S3I7_SALRD
dpsA; starvation induced DNA binding protein
Starvation induced DNA binding protein {ECO:0000313|EMBL:CBH24217.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Sa
sw_4_scaffold_96_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

2548..4962
DNA (2415bp) protein (805aa)
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952, ECO:0000313|EMBL:CBH24218.1};; DNA topoisomerase I {ECO:0000256|HAMAP-Rule:MF_00952}; TaxID=761659
DNA topoisomerase 1 n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H863_SALRM
topA; DNA topoisomerase I
sw_4_scaffold_96_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(5054..6028)
DNA (975bp) protein (325aa)
rsgA; ribosome-associated GTPase; K06949 ribosome biogenesis GTPase [EC:3.6.1.-] id=24659060 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Putative ribosome biogenesis GTPase RsgA {ECO:0000256|HAMAP-Rule:MF_01820}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_01820};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incert
rsgA; ribosome-associated GTPase
sw_4_scaffold_96_8
Salinibacter_ruber, Salinibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

6085..6423
DNA (339bp) protein (113aa)
hypothetical protein id=24659061 bin=Salinibacter_ruber tax=Salinibacter_ruber
hypothetical protein id=24659061 bin=Salinibacter_ruber tax=Salinibacter_ruber
sw_4_scaffold_96_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

6494..6736
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S3I4_SALRD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC44427.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_4_scaffold_96_10
unknown

Not on your lists

6901..7791
DNA (891bp) protein (297aa)

This feature has no annotations

sw_4_scaffold_96_11
Salisaeta longa, Salisaeta, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

7978..9183
DNA (1206bp) protein (402aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B5F3A6
sw_4_scaffold_96_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(9225..11186)
DNA (1962bp) protein (654aa)
signal transduction histidine kinase id=24659063 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
signal transduction histidine kinase
Signal transduction histidine kinase {ECO:0000313|EMBL:CBH24221.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Sali
sw_4_scaffold_96_13
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(11277..12698)
DNA (1422bp) protein (474aa)
Cystathionine beta-synthase {ECO:0000313|EMBL:CBH24222.1}; EC=4.2.1.22 {ECO:0000313|EMBL:CBH24222.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodotherm
Cystathionine beta-synthase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H867_SALRM
cysK; cystathionine beta-synthase
sw_4_scaffold_96_14
unknown

Not on your lists

comp(12712..12951)
DNA (240bp) protein (80aa)

This feature has no annotations

sw_4_scaffold_96_15
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(13206..14291)
DNA (1086bp) protein (362aa)
hypothetical protein
hypothetical protein id=24659065 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH24224.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_4_scaffold_96_16
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

14441..15622
DNA (1182bp) protein (394aa)
Succinyl-CoA ligase [ADP-forming] subunit beta {ECO:0000255|HAMAP-Rule:MF_00558}; EC=6.2.1.5 {ECO:0000255|HAMAP-Rule:MF_00558};; Succinyl-CoA synthetase subunit beta {ECO:0000255|HAMAP-Rule:MF_00558};
Succinyl-CoA ligase [ADP-forming] subunit beta n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=SUCC_SALRD
succinyl-CoA synthetase beta chain
sw_4_scaffold_96_17
Haloterrigena thermotolerans, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15594..16694)
DNA (1101bp) protein (367aa)
Modification methylase {ECO:0000256|RuleBase:RU362026}; EC=2.1.1.113 {ECO:0000256|RuleBase:RU362026};; TaxID=1227489 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloter
DNA methylase N-4/N-6 domain-containing protein n=1 Tax=Haloterrigena thermotolerans DSM 11522 RepID=M0BCI0_9EURY
DNA modification methylase
sw_4_scaffold_96_18
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(17053..19974)
DNA (2922bp) protein (974aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S4G1_SALRD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC44616.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_4_scaffold_96_19
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(20068..21051)
DNA (984bp) protein (328aa)
Xylose repressor n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S4G0_SALRD
xylose repressor
Xylose repressor {ECO:0000313|EMBL:ABC44663.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (stra
sw_4_scaffold_96_20
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(21142..21441)
DNA (300bp) protein (100aa)
ftsB; cell division protein
ftsB; cell division protein; K05589 cell division protein FtsB id=24657658 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Septum formation initiator superfamily {ECO:0000313|EMBL:ABC45110.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Sa
sw_4_scaffold_96_21
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(21450..22739)
DNA (1290bp) protein (430aa)
Enolase {ECO:0000256|HAMAP-Rule:MF_00318, ECO:0000313|EMBL:CBH23886.1}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318, ECO:0000313|EMBL:CBH23886.1};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMA
Enolase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H781_SALRM
eno2; enolase
sw_4_scaffold_96_22
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(22933..24021)
DNA (1089bp) protein (363aa)
hypothetical protein
Tetratricopeptide repeat domain protein {ECO:0000313|EMBL:CBH23887.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="S
hypothetical protein id=24657660 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
sw_4_scaffold_96_23
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(24018..24263)
DNA (246bp) protein (82aa)
hypothetical protein id=24657660 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
hypothetical protein
Tetratricopeptide repeat domain protein {ECO:0000313|EMBL:CBH23887.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="S
sw_4_scaffold_96_24
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(24400..25740)
DNA (1341bp) protein (447aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H783_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH23888.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_4_scaffold_96_25
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(25793..27145)
DNA (1353bp) protein (451aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H784_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH23889.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_4_scaffold_96_26
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(27359..28129)
DNA (771bp) protein (257aa)
glgA; glycogen synthase; K00703 starch synthase [EC:2.4.1.21] id=24657663 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Glycogen synthase {ECO:0000313|EMBL:CBH23890.1}; EC=2.4.1.21 {ECO:0000313|EMBL:CBH23890.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Sal
glgA; glycogen synthase
sw_4_scaffold_96_27
Salisaeta longa, Salisaeta, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

29545..31281
DNA (1737bp) protein (579aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B76485
sw_4_scaffold_96_28
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

31399..32817
DNA (1419bp) protein (473aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B4A27D
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH23203.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
Displaying 28 items

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