ggKbase home page

sw_4_scaffold_40_27

Organism: SW_4_Salinibacter_ruber_64_21

partial RP 39 / 55 BSCG 38 / 51 ASCG 6 / 38
Location: 34553..35281

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylat similarity UNIPROT
DB: UniProtKB
  • Identity: 50.9
  • Coverage: 232.0
  • Bit_score: 230
  • Evalue 2.60e-57
tRNA pseudouridine synthase B n=1 Tax=Salisaeta longa RepID=UPI0003B743E4 similarity UNIREF
DB: UNIREF100
  • Identity: 59.9
  • Coverage: 242.0
  • Bit_score: 262
  • Evalue 4.40e-67
tRNA pseudouridine synthase B similarity KEGG
DB: KEGG
  • Identity: 50.9
  • Coverage: 232.0
  • Bit_score: 230
  • Evalue 5.20e-58

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodothermus marinus → Rhodothermus → Bacteroidetes Order II. Incertae sedis → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 729
GTGCCGTCCGCCGCCGCCCAGCGCGACATTCCGCCGGAGATGGTGTACACGCCCCCCGATCGTCCGGCGACGTGGGGGGAGGGCGCGATTCTCCCGGTGGATAAGCCGAGAAGCCTCCCGTCGTTCGATGTCGTGGAGACCGTTCGAGAGAGCACCGAGGTGCAGAAGGTGGGGCACGCCGGCACGCTCGACCCCATGGCGACCGGCCTGCTCATCATCCTCGTGGCCCGGCCCGCCACGCGCCTGCAGGCAGCCTGCATGCACCTGCCCAAAACCTACGAGGCCACCCTTCGCCTCGGCGAAACGACGCCCTCCTACGACACCGAGACCGAGGTCGTGAAGCGCACCGATCCGTCAGGGATTACCCGGGCGGACATCGACGAGGCCCGCGAGTCCTTTCTCGGTCCCATCGAGCAGGTGCCGCCCATGTACTCGGCAGTGCGGGTGGACGGCGAGCGGCTCTACGAAAAGGCCCGCCGGGGCGAGACCGTGGACCGTCCCCCGCGACAGGTGCGCGTCGACCGCTTTGAACTGATGGAATGGGCGTCCCCGGATCTCACCGTCCGGATCGAGTGCTCGAAAGGGACCTACATCCGGGCGCTGGCCCGCGATCTGGGCGAGACACTGGGGGTGGGGGCGCACCTTACGGCCCTCCGCCGGACGGACATCGCGGCGTTTTCGGTGGACGACAGTTGGACGCTGGCGGCACTGGAGGAGACGCTATCATAG
PROTEIN sequence
Length: 243
VPSAAAQRDIPPEMVYTPPDRPATWGEGAILPVDKPRSLPSFDVVETVRESTEVQKVGHAGTLDPMATGLLIILVARPATRLQAACMHLPKTYEATLRLGETTPSYDTETEVVKRTDPSGITRADIDEARESFLGPIEQVPPMYSAVRVDGERLYEKARRGETVDRPPRQVRVDRFELMEWASPDLTVRIECSKGTYIRALARDLGETLGVGAHLTALRRTDIAAFSVDDSWTLAALEETLS*