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sw_4_scaffold_185

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_4_scaffold_185_1
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

2..565
-----------------
DNA (564bp)
protein (188aa)
Monofunctional biosynthetic peptidoglycan transglycosylase {ECO:0000256|SAAS:SAAS00055690}; EC=2.4.-.- {ECO:0000256|SAAS:SAAS00279069};; EC=2.4.2.- {ECO:0000256|SAAS:SAAS00055699};; Flags: Precursor;;
Monofunctional biosynthetic peptidoglycan transglycosylase n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MHP9_RHOM4
monofunctional biosynthetic peptidoglycan transglycosylase
sw_4_scaffold_185_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

600..1643
-----------------
DNA (1044bp)
protein (348aa)
L-allo-threonine aldolase {ECO:0000313|EMBL:ABC44102.1}; EC=4.1.2.- {ECO:0000313|EMBL:ABC44102.1};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermace
L-allo-threonine aldolase n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S2N4_SALRD
ltaE; threonine aldolase
sw_4_scaffold_185_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(1659..2270)
-----------------
DNA (612bp)
protein (204aa)
Pyridoxamine 5'-phosphate oxidase {ECO:0000313|EMBL:CBH24535.1}; EC=1.4.3.5 {ECO:0000313|EMBL:CBH24535.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodo
Pyridoxamine 5'-phosphate oxidase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H930_SALRM
pdxH; pyridoxamine 5'-phosphate oxidase
sw_4_scaffold_185_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(2364..3026)
-----------------
DNA (663bp)
protein (221aa)
Possible 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase n=2 Tax=Salinibacter ruber RepID=D5H929_SALRM
mhpD; 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase
Possible 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase {ECO:0000313|EMBL:CBH24534.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibact
sw_4_scaffold_185_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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3161..3622
-----------------
DNA (462bp)
protein (154aa)
50S ribosomal protein L21 n=2 Tax=Salinibacter ruber RepID=RL21_SALRD
rplU; 50S ribosomal protein L21
50S ribosomal protein L21 {ECO:0000255|HAMAP-Rule:MF_01363}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacte
sw_4_scaffold_185_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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3674..3934
-----------------
DNA (261bp)
protein (87aa)
rpmA; 50S ribosomal protein L27
rpmA; 50S ribosomal protein L27; K02899 large subunit ribosomal protein L27 id=24659369 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
50S ribosomal protein L27 {ECO:0000256|HAMAP-Rule:MF_00539, ECO:0000313|EMBL:CBH24532.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salini
sw_4_scaffold_185_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

4238..5479
-----------------
DNA (1242bp)
protein (414aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H926_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24531.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_4_scaffold_185_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(5472..6398)
-----------------
DNA (927bp)
protein (309aa)
hypothetical protein
hypothetical protein; K09933 hypothetical protein id=24659367 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH24530.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_4_scaffold_185_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

6668..8743
-----------------
DNA (2076bp)
protein (692aa)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodotherm
peptidyl-prolyl cis-trans isomerase; K01802 peptidylprolyl isomerase [EC:5.2.1.8] id=24659366 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
peptidyl-prolyl cis-trans isomerase
sw_4_scaffold_185_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(8792..9631)
-----------------
DNA (840bp)
protein (280aa)
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028055}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197, ECO:000
Diaminopimelate epimerase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H923_SALRM
dapF; diaminopimelate epimerase
sw_4_scaffold_185_11
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

9765..10724
-----------------
DNA (960bp)
protein (320aa)
PhoH family protein n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S2P3_SALRD
PhoH family protein
PhoH family protein {ECO:0000313|EMBL:ABC43690.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (s
sw_4_scaffold_185_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(10851..11705)
-----------------
DNA (855bp)
protein (285aa)
3-hydroxybutyryl-CoA dehydrogenase; K00074 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] id=24659363 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
3-hydroxybutyryl-CoA dehydrogenase {ECO:0000313|EMBL:ABC45405.1}; EC=1.1.1.157 {ECO:0000313|EMBL:ABC45405.1};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rh
3-hydroxybutyryl-CoA dehydrogenase
sw_4_scaffold_185_13
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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12111..13001
-----------------
DNA (891bp)
protein (297aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
hypothetical protein id=5026843 bin=GWA2_Ignavibacteria_55_11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
sw_4_scaffold_185_14
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(13237..13674)
-----------------
DNA (438bp)
protein (146aa)
Aspartate 1-decarboxylase {ECO:0000255|HAMAP-Rule:MF_00446}; EC=4.1.1.11 {ECO:0000255|HAMAP-Rule:MF_00446};; Aspartate alpha-decarboxylase {ECO:0000255|HAMAP-Rule:MF_00446}; Contains:; Aspartate 1-dec
Aspartate 1-decarboxylase n=2 Tax=Salinibacter ruber RepID=PAND_SALRD
panD; aspartate 1-decarboxylase
sw_4_scaffold_185_15
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(13721..14602)
-----------------
DNA (882bp)
protein (294aa)
Pantothenate synthetase {ECO:0000255|HAMAP-Rule:MF_00158}; Short=PS {ECO:0000255|HAMAP-Rule:MF_00158};; EC=6.3.2.1 {ECO:0000255|HAMAP-Rule:MF_00158};; Pantoate--beta-alanine ligase {ECO:0000255|HAMAP-
Pantothenate synthetase n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=PANC_SALRD
panC; pantoate--beta-alanine ligase
sw_4_scaffold_185_16
Halomonas sp. S2151, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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14961..15992
-----------------
DNA (1032bp)
protein (344aa)
sodium:calcium antiporter n=1 Tax=Halomonas smyrnensis RepID=UPI000368CF20
Sodium:calcium antiporter {ECO:0000313|EMBL:KJZ15053.1}; TaxID=579478 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas sp. S215
Na+/Ca2+-exchanging protein
sw_4_scaffold_185_17
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

Not on your lists

comp(16073..16531)
-----------------
DNA (459bp)
protein (153aa)
Uncharacterized protein n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I114_CALAS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL98951.1}; TaxID=926550 species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerophila (strain DSM 1
sw_4_scaffold_185_18
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

Not on your lists

comp(16652..18790)
-----------------
DNA (2139bp)
protein (713aa)
Uncharacterized protein n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I113_CALAS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL98950.1}; TaxID=926550 species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerophila (strain DSM 1
sw_4_scaffold_185_19
Chryseobacterium oranimense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

19105..19809
-----------------
DNA (705bp)
protein (235aa)
Uncharacterized protein n=1 Tax=Joostella marina DSM 19592 RepID=I3C7Z6_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:CEJ69686.1}; TaxID=1300143 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium
hypothetical protein
sw_4_scaffold_185_20
Cyclobacterium qasimii, Cyclobacterium, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

19861..20655
-----------------
DNA (795bp)
protein (265aa)
Uncharacterized protein n=1 Tax=Cyclobacterium qasimii M12-11B RepID=S7VI20_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EPR69626.1}; TaxID=641524 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cyclobacterium.;" source="Cyclobacterium qasimii M12-
hypothetical protein
sw_4_scaffold_185_21
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

20710..21516
-----------------
DNA (807bp)
protein (269aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S269_SALRD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC45831.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_4_scaffold_185_22
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(21561..22067)
-----------------
DNA (507bp)
protein (169aa)
auracyanin A
auracyanin A id=24659545 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Auracyanin A {ECO:0000313|EMBL:ABC43792.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (strain D
Displaying 22 items

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