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sw_4_scaffold_2084

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_4_scaffold_2084_1
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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2..691
-----------------
DNA (690bp)
protein (230aa)
ileS; isoleucyl-tRNA synthetase; K01870 isoleucyl-tRNA synthetase [EC:6.1.1.5] id=24657306 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Isoleucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02003, ECO:0000256|SAAS:SAAS00106059}; EC=6.1.1.5 {ECO:0000256|HAMAP-Rule:MF_02003, ECO:0000256|SAAS:SAAS00106059};; Isoleucyl-tRNA synthetase {ECO:0
ileS; isoleucyl-tRNA synthetase
sw_4_scaffold_2084_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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759..1226
-----------------
DNA (468bp)
protein (156aa)
DnaK suppressor protein n=2 Tax=Salinibacter ruber RepID=D5H5Z9_SALRM
dksA; DnaK suppressor protein
Putative RNA polymerase-binding protein DksA {ECO:0000313|EMBL:ABC45591.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" sour
sw_4_scaffold_2084_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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1295..1903
-----------------
DNA (609bp)
protein (203aa)
ruvA; Holliday junction DNA helicase ruvA; K03550 holliday junction DNA helicase RuvA [EC:3.6.4.12] id=24657308 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Holliday junction ATP-dependent DNA helicase RuvA {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058935}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058896};; TaxID
ruvA; Holliday junction DNA helicase RuvA
sw_4_scaffold_2084_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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2122..3099
-----------------
DNA (978bp)
protein (326aa)
prs; ribose-phosphate pyrophosphokinase 1; K00948 ribose-phosphate pyrophosphokinase [EC:2.7.6.1] id=24657309 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Ribose-phosphate pyrophosphokinase 1 {ECO:0000313|EMBL:CBH23456.1}; EC=2.7.6.1 {ECO:0000313|EMBL:CBH23456.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rh
prs; ribose-phosphate pyrophosphokinase 1
sw_4_scaffold_2084_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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4031..4474
-----------------
DNA (444bp)
protein (148aa)
deoxycytidine triphosphate deaminase
deoxycytidine triphosphate deaminase id=24657311 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Deoxycytidine triphosphate deaminase {ECO:0000313|EMBL:ABC44891.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Sali
sw_4_scaffold_2084_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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4548..5345
-----------------
DNA (798bp)
protein (266aa)
mutM; formamidopyrimidine-DNA glycosylase; K10563 formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] id=24657312 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Formamidopyrimidine-DNA glycosylase {ECO:0000313|EMBL:ABC46168.1}; EC=3.2.2.23 {ECO:0000313|EMBL:ABC46168.1};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rh
mutM; formamidopyrimidine-DNA glycosylase
sw_4_scaffold_2084_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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5426..6097
-----------------
DNA (672bp)
protein (224aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H605_SALRM
Uncharacterized protein {ECO:0000313|EMBL:CBH23460.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
hypothetical protein
sw_4_scaffold_2084_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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6138..7157
-----------------
DNA (1020bp)
protein (340aa)
Putative ATPase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H606_SALRM
ATPase
Putative ATPase {ECO:0000313|EMBL:CBH23461.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (strai
sw_4_scaffold_2084_9
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(7215..8597)
-----------------
DNA (1383bp)
protein (461aa)
Tryptophan synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00133}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00133};; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis;
Tryptophan synthase beta chain n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MI76_RHOM4
pyridoxal-phosphate dependent TrpB-like protein
sw_4_scaffold_2084_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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8817..9872
-----------------
DNA (1056bp)
protein (352aa)
GTP-binding protein TypA n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H607_SALRM
typA; GTP-binding protein TypA
GTP-binding protein TypA {ECO:0000313|EMBL:CBH23462.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rub
Displaying 10 items

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