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sw_4_scaffold_2878

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Displaying 13 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_4_scaffold_2878_1

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comp(152..892)
DNA (741bp) protein (247aa)
Uncharacterized protein n=1 Tax=uncultured archaeon A07HR67 RepID=V4X7J9_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:ESS03644.1}; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67.;"
hypothetical protein
sw_4_scaffold_2878_2
Halorubrum aidingense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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1122..1931
DNA (810bp) protein (270aa)
2,5-didehydrogluconate reductase (EC:1.1.1.274)
Aldo/keto reductase n=1 Tax=Halorubrum aidingense JCM 13560 RepID=M0P7A2_9EURY
Aldo/keto reductase {ECO:0000313|EMBL:EMA65718.1}; TaxID=1230454 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum aidingense JCM 13560.;"
sw_4_scaffold_2878_3
Natrinema gari, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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2323..3786
DNA (1464bp) protein (488aa)
PAS sensor protein n=1 Tax=Natrinema gari JCM 14663 RepID=L9YX41_9EURY
PAS sensor protein {ECO:0000313|EMBL:ELY77473.1}; TaxID=1230459 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema gari JCM 14663.;"
PAS sensor protein
sw_4_scaffold_2878_4
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3805..4692)
DNA (888bp) protein (296aa)
Formimidoylglutamase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N948_9EURY
formimidoylglutamase
Formimidoylglutamase {ECO:0000313|EMBL:EMA53175.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 898
sw_4_scaffold_2878_5
unknown

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comp(4689..4982)
DNA (294bp) protein (98aa)

This feature has no annotations

sw_4_scaffold_2878_6
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(5182..5862)
DNA (681bp) protein (227aa)
Amidohydrolase n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NQ18_HALBP
amidohydrolase
Amidohydrolase {ECO:0000313|EMBL:ELY23555.1}; Predicted amidohydrolase {ECO:0000313|EMBL:ADQ67763.1}; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeo
sw_4_scaffold_2878_7
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(5996..6547)
DNA (552bp) protein (184aa)
S-adenosylmethionine-dependent methyltransferase n=1 Tax=Halomicrobium katesii RepID=UPI00037896F0
methyltransferase type 11
Methyltransferase type 11 {ECO:0000313|EMBL:ACV49418.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohatae
sw_4_scaffold_2878_8
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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6742..6915
DNA (174bp) protein (58aa)
Uncharacterized protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IU64_NATPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAI48319.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (st
sw_4_scaffold_2878_9
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(6912..7916)
DNA (1005bp) protein (335aa)
l-threonine aldolase (EC:4.1.2.5)
Threonine aldolase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D3P0_9EURY
Threonine aldolase {ECO:0000313|EMBL:ELZ28779.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-1.;
sw_4_scaffold_2878_10
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(7968..9581)
DNA (1614bp) protein (538aa)
Signal-transducing histidine kinase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MMX7_9EURY
Signal-transducing histidine kinase {ECO:0000313|EMBL:EMA46996.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sacc
kinA1; signal-transducing histidine kinase-like protein
sw_4_scaffold_2878_11
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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9709..10188
DNA (480bp) protein (160aa)
PUA domain protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IUC0_NATPD
RNA-binding protein
PUA domain protein {ECO:0000313|EMBL:CAI48261.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (strain
sw_4_scaffold_2878_12
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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10236..10628
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N6Z9_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EMA52450.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
sw_4_scaffold_2878_13
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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10710..10850
DNA (141bp) protein (47aa)
PUA domain protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IUC0_NATPD
RNA-binding protein
PUA domain protein {ECO:0000313|EMBL:CAI48261.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (strain
Displaying 13 items

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