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sw_4_scaffold_1022

Search features with annotation key words

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_4_scaffold_1022_1
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3..977
DNA (975bp) protein (325aa)
Cation transporter n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CQZ6_9EURY
Cation transporter {ECO:0000313|EMBL:ELZ24309.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-1.;
cation transporter
sw_4_scaffold_1022_2
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1099..1764
DNA (666bp) protein (222aa)
TrkA-N domain protein n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4HP62_9EURY
TrkA-N domain protein {ECO:0000313|EMBL:ESP89714.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobonu
TrkA-N domain protein
sw_4_scaffold_1022_3
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1767..2903
DNA (1137bp) protein (379aa)
Uncharacterized protein n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4HIU2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ESP89713.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobo
hypothetical protein
sw_4_scaffold_1022_4
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3357..3926)
DNA (570bp) protein (190aa)
Transposase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NCK8_9EURY
Transposase {ECO:0000313|EMBL:EMA54410.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8989.;"
transposase
sw_4_scaffold_1022_5
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4042..4560
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MSP2_HALMO
Uncharacterized protein {ECO:0000313|EMBL:EMA48373.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 1307
hypothetical protein
sw_4_scaffold_1022_6
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4557..5024
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MUC6_HALMO
Uncharacterized protein {ECO:0000313|EMBL:EMA48374.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 1307
hypothetical protein
sw_4_scaffold_1022_7
Haloarcula sinaiiensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(5043..7136)
DNA (2094bp) protein (698aa)
cpdB2; 2'3'-cyclic-nucleotide 2'-phosphodiesterase (EC:3.1.4.16)
2'3'-cyclic-nucleotide 2'-phosphodiesterase n=3 Tax=Haloarcula RepID=Q5V3N0_HALMA
2'3'-cyclic-nucleotide 2'-phosphodiesterase {ECO:0000313|EMBL:EMA13524.1}; TaxID=662476 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcu
sw_4_scaffold_1022_8
unknown

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7402..7524
DNA (123bp) protein (41aa)

This feature has no annotations

sw_4_scaffold_1022_9
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(7698..8309)
DNA (612bp) protein (204aa)
Hydrolase of the alpha/beta superfamily-like protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MU96_9EURY
Hydrolase of the alpha/beta superfamily-like protein {ECO:0000313|EMBL:EMA49196.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source
hydrolase of the alpha/beta superfamily-like protein
sw_4_scaffold_1022_10
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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8364..9218
DNA (855bp) protein (285aa)
Phage shock protein A, PspA n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MEA7_9EURY
Phage shock protein A, PspA {ECO:0000313|EMBL:EMA44061.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyti
phage shock protein A, PspA
sw_4_scaffold_1022_11
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9284..9487
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MI20_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA49198.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_4_scaffold_1022_12
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9539..10009)
DNA (471bp) protein (157aa)
Deoxyuridine 5'-triphosphate nucleotidohydrolase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MHA3_9EURY
Deoxyuridine 5'-triphosphate nucleotidohydrolase {ECO:0000313|EMBL:EMA44059.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Ha
deoxycytidine deaminase
Displaying 12 items

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