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sw_4_scaffold_2082

Search features with annotation key words

Displaying 15 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_4_scaffold_2082_1
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1..741
DNA (741bp) protein (247aa)
Elongation factor 2 n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MX53_9EURY
Elongation factor 2 {ECO:0000256|HAMAP-Rule:MF_00054, ECO:0000256|SAAS:SAAS00088569}; Short=EF-2 {ECO:0000256|HAMAP-Rule:MF_00054};; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Haloba
elongation factor EF-2
sw_4_scaffold_2082_2
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1106..1324)
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MVX2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA49902.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_4_scaffold_2082_3
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1466..2005
DNA (540bp) protein (180aa)
Allosteric regulator of homoserine dehydrogenase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MC75_9EURY
Allosteric regulator of homoserine dehydrogenase {ECO:0000313|EMBL:EMA43372.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Ha
allosteric regulator of homoserine dehydrogenase
sw_4_scaffold_2082_4
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2002..2955
DNA (954bp) protein (318aa)
homoserine dehydrogenase (EC:1.1.1.3)
Homoserine dehydrogenase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MZQ0_9EURY
Homoserine dehydrogenase {ECO:0000313|EMBL:EMA49900.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
sw_4_scaffold_2082_5
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3090..4427
DNA (1338bp) protein (446aa)
elongation factor 1-alpha (EC:3.6.5.3)
Elongation factor 1-alpha n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MG18_9EURY
Elongation factor 1-alpha {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004060}; Short=EF-1-alpha {ECO:0000256|HAMAP-Rule:MF_00118};; Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118};
sw_4_scaffold_2082_6
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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4406..4519
DNA (114bp) protein (38aa)
30S ribosomal protein S10 n=2 Tax=Halovivax RepID=L0IBQ8_HALRX
30S ribosomal protein S10
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508, ECO:0000256|SAAS:SAAS00243320}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" sour
sw_4_scaffold_2082_7
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4619..5236
DNA (618bp) protein (206aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MDE8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA43368.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_4_scaffold_2082_trna_1
unknown

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5247..5318
DNA (72bp)
transferRNA
sw_4_scaffold_2082_8
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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5540..6289
DNA (750bp) protein (250aa)
PHP domain-containing protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MWC0_9EURY
PHP domain-containing protein {ECO:0000313|EMBL:EMA49896.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodina
PHP domain-containing protein
sw_4_scaffold_2082_9
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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6370..6864
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MSH0_HALMO
Uncharacterized protein {ECO:0000313|EMBL:EMA47694.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 1307
hypothetical protein
sw_4_scaffold_2082_10
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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6867..7190
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MQS0_HALMO
Uncharacterized protein {ECO:0000313|EMBL:EMA47693.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 1307
sw_4_scaffold_2082_11
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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7235..7549
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M291_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA39947.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
hypothetical protein
sw_4_scaffold_2082_12
Halovivax asiaticus, Halovivax, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7594..7926)
DNA (333bp) protein (111aa)
N-6 DNA methylase n=1 Tax=Halovivax asiaticus JCM 14624 RepID=M0BF98_9EURY
N-6 DNA methylase {ECO:0000313|EMBL:ELZ08339.1}; TaxID=1227490 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halovivax.;" source="Halovivax asiaticus JCM 14624.;"
sw_4_scaffold_2082_13
Natrialba aegyptia, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(8073..8759)
DNA (687bp) protein (229aa)
N-6 DNA methylase n=1 Tax=Natrialba aegyptia DSM 13077 RepID=M0B7J8_9EURY
N-6 DNA methylase {ECO:0000313|EMBL:ELZ06795.1}; TaxID=1227491 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba aegyptia DSM 13077.;"
sw_4_scaffold_2082_14
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8809..9267)
DNA (459bp) protein (153aa)
Ribonuclease R n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MG13_9EURY
Ribonuclease R {ECO:0000313|EMBL:EMA43365.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus DSM 5350.
ribonuclease R
Displaying 15 items

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