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sw_4_scaffold_230

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_4_scaffold_230_1
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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67..930
DNA (864bp) protein (288aa)
RimK family alpha-L-glutamate ligase/30S ribosomal protein S6 modification protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MX74_9EURY
RimK family alpha-L-glutamate ligase/30S ribosomal protein S6 modification protein {ECO:0000313|EMBL:EMA49923.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobact
alpha-L-glutamate ligase
sw_4_scaffold_230_2
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1158..1547)
DNA (390bp) protein (130aa)
Hsp20 type chaperone n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MG42_9EURY
Hsp20 type chaperone {ECO:0000313|EMBL:EMA43390.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus DSM
hsp20_1; hsp20-type chaperone
sw_4_scaffold_230_3
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1768..2292)
DNA (525bp) protein (175aa)
PilT protein domain protein n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NQV2_HALUD
PilT protein domain protein
PilT protein domain protein {ECO:0000313|EMBL:ACV11856.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus utahensis (
sw_4_scaffold_230_4
Haloferax mucosum, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(2703..3326)
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Haloferax mucosum ATCC BAA-1512 RepID=M0IAX5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ93955.1}; TaxID=662479 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax mucosum ATCC BAA-1512.;
sw_4_scaffold_230_5
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3491..4567)
DNA (1077bp) protein (359aa)
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00559, ECO:0000256|RuleBase:RU003388}; Short=GAPDH {ECO:0000256|HAMAP-Rule:MF_00559};; EC=1.2.1.59 {ECO:0000256|HAMAP-Rule:MF_00559,
Glyceraldehyde-3-phosphate dehydrogenase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MWF0_9EURY
glyceraldehyde-3-phosphate dehydrogenase, type II
sw_4_scaffold_230_6
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4648..5625
DNA (978bp) protein (326aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MZS2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA49920.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_4_scaffold_230_7
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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5677..5838
DNA (162bp) protein (54aa)
Oxidoreductase ( zinc-containing alcohol dehydrogenase) {ECO:0000313|EMBL:EMA43387.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" sou
sw_4_scaffold_230_8
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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6093..6515
DNA (423bp) protein (141aa)
Oxidoreductase ( zinc-containing alcohol dehydrogenase) n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MYI8_9EURY
Oxidoreductase ( zinc-containing alcohol dehydrogenase) {ECO:0000313|EMBL:EMA49919.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" sou
adh2; alcohol dehydrogenase
sw_4_scaffold_230_9
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6512..7156
DNA (645bp) protein (215aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MCB1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA43386.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
conserved hypothetical protein (DUF2387)
sw_4_scaffold_230_10
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7158..7820
DNA (663bp) protein (221aa)
Protein-L-isoaspartate O-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00090}; EC=2.1.1.77 {ECO:0000256|HAMAP-Rule:MF_00090};; L-isoaspartyl protein carboxyl methyltransferase {ECO:0000256|HAMAP-Rule:M
Protein-L-isoaspartate O-methyltransferase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MG37_9EURY
pimT_1; protein-L-isoaspartate O-methyltransferase
sw_4_scaffold_230_11
Haloterrigena thermotolerans, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(7883..9043)
DNA (1161bp) protein (387aa)
Group 1 glycosyl transferase n=1 Tax=Haloterrigena thermotolerans DSM 11522 RepID=M0BJL3_9EURY
group 1 glycosyl transferase
Group 1 glycosyl transferase {ECO:0000313|EMBL:ELZ10667.1}; TaxID=1227489 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena thermotoler
sw_4_scaffold_230_12
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9091..9819
DNA (729bp) protein (243aa)
protein-L-isoaspartate(D-aspartate)O-methyltransferase (EC:2.1.1.77)
Protein-L-isoaspartate(D-aspartate) O-methyltransferase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MYI3_9EURY
Protein-L-isoaspartate(D-aspartate) O-methyltransferase {ECO:0000313|EMBL:EMA49914.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" sou
sw_4_scaffold_230_13
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9922..11700
DNA (1779bp) protein (593aa)
Asparagine synthase n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M2W6_9EURY
Asparagine synthase {ECO:0000313|EMBL:EMA40157.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100A6.;
asparagine synthase
sw_4_scaffold_230_14
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12619..15774
DNA (3156bp) protein (1052aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N429_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA51445.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
hypothetical protein
sw_4_scaffold_230_15
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16231..18306
DNA (2076bp) protein (692aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N8X0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA53998.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
hypothetical protein
sw_4_scaffold_230_trna_1
unknown

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comp(18610..18682)
DNA (73bp)
transferRNA
sw_4_scaffold_230_16
unknown

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comp(18938..19045)
DNA (108bp) protein (36aa)

This feature has no annotations

sw_4_scaffold_230_17
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19238..20596
DNA (1359bp) protein (453aa)
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; TaxID=1227456 species="Archaea; Euryarchaeota; Halo
dinP; DNA polymerase IV (archaeal DinB-like DNA polymerase) (EC:2.7.7.7)
DNA polymerase IV n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MWG6_9EURY
sw_4_scaffold_230_18
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20627..20782
DNA (156bp) protein (52aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MXN5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA50063.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
sw_4_scaffold_230_19
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20776..21093
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MXN5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA50063.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
Displaying 20 items

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