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sw_4_scaffold_235

Search features with annotation key words

Displaying 14 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_4_scaffold_235_1
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3..263)
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0MV85_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA49657.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
hypothetical protein
sw_4_scaffold_235_2
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(260..1489)
DNA (1230bp) protein (410aa)
NurA domain-containing protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0MVN0_9EURY
NurA domain-containing protein {ECO:0000313|EMBL:EMA49656.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailande
NurA domain-containing protein
sw_4_scaffold_235_3
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1489..4212)
DNA (2724bp) protein (908aa)
SMC domain-containing protein n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0M666_HALMO
SMC domain-containing protein {ECO:0000313|EMBL:EMA41191.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DS
SMC domain-containing protein
sw_4_scaffold_235_4
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4209..5675)
DNA (1467bp) protein (489aa)
Metallophosphoesterase n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0MXT1_9EURY
Metallophosphoesterase {ECO:0000313|EMBL:EMA49654.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JCM
metallophosphoesterase
sw_4_scaffold_235_5
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5856..6725)
DNA (870bp) protein (290aa)
Succinyl-CoA ligase [ADP-forming] subunit alpha {ECO:0000256|RuleBase:RU000699}; EC=6.2.1.5 {ECO:0000256|RuleBase:RU000699};; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacterial
Succinyl-CoA ligase [ADP-forming] subunit alpha n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N0Q3_9EURY
succinyl-CoA synthetase subunit alpha
sw_4_scaffold_235_6
unknown

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comp(6722..6811)
DNA (90bp) protein (30aa)

This feature has no annotations

sw_4_scaffold_235_7
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6808..7971)
DNA (1164bp) protein (388aa)
Succinyl-CoA ligase [ADP-forming] subunit beta {ECO:0000256|HAMAP-Rule:MF_00558}; EC=6.2.1.5 {ECO:0000256|HAMAP-Rule:MF_00558};; Succinyl-CoA synthetase subunit beta {ECO:0000256|HAMAP-Rule:MF_00558};
sucC; succinyl-CoA synthetase subunit beta (EC:6.2.1.5)
Succinyl-CoA ligase [ADP-forming] subunit beta n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N1V0_9EURY
sw_4_scaffold_235_8
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8113..8322)
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MYJ7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA50676.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_4_scaffold_235_9
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

8752..10089
DNA (1338bp) protein (446aa)
aminomethyltransferase (EC:2.1.2.10)
Aminomethyltransferase n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LWW6_9EURY
aminomethyltransferase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
sw_4_scaffold_235_10
Haloarcula sp. CBA1115, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10230..11012)
DNA (783bp) protein (261aa)
L-arabinose operon protein AraL n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JRZ1_HALVA
HAD family hydrolase
HAD family hydrolase {ECO:0000313|EMBL:AJF24293.1}; TaxID=1592728 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sp. CBA1115.;"
sw_4_scaffold_235_11
Halorubrum coriense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11009..12034)
DNA (1026bp) protein (342aa)
Sulfate/molybdate ABC transporter ATP-binding protein n=1 Tax=Halorubrum coriense DSM 10284 RepID=M0E970_9EURY
Sulfate/molybdate ABC transporter ATP-binding protein {ECO:0000313|EMBL:ELZ43427.1}; TaxID=1227466 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="H
cysA; ABC-type sulfate/molybdate transport systems,ATP-binding protein
sw_4_scaffold_235_12
Halorubrum coriense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12038..12871)
DNA (834bp) protein (278aa)
ABC-type transport system permease n=1 Tax=Halorubrum coriense DSM 10284 RepID=M0E6L7_9EURY
ABC-type transport system permease {ECO:0000313|EMBL:ELZ43426.1}; TaxID=1227466 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum coriense
potC; ABC-type transport system permease
sw_4_scaffold_235_13
Haloferax mediterranei, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12868..13794)
DNA (927bp) protein (309aa)
ABC-type transport system permease n=1 Tax=Haloferax mediterranei (strain ATCC 33500 / DSM 1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 / R-4) RepID=I3RAE6_HALMT
cysU; ABC-type transport system permease
ABC-type transport system permease {ECO:0000313|EMBL:ELZ97460.1}; ABC-type transport system permease protein {ECO:0000313|EMBL:AFK21206.1}; Sulfate ABC transporter permease {ECO:0000313|EMBL:AHZ24684.
sw_4_scaffold_235_14
Haloferax mediterranei, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13798..14217)
DNA (420bp) protein (140aa)
ABC-type transport system periplasmic substrate-binding protein n=1 Tax=Haloferax mediterranei (strain ATCC 33500 / DSM 1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 / R-4) RepID=I3RAE7_HALMT
ABC-type transport system periplasmic substrate-binding protein
ABC-type transport system periplasmic substrate-binding protein {ECO:0000313|EMBL:AFK21207.1}; Sulfate ABC transporter substrate-binding protein {ECO:0000313|EMBL:AHZ24683.1}; TaxID=523841 species="Ar
Displaying 14 items

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